KEGG   Xenopus tropicalis (tropical clawed frog): 549283
Entry
549283            CDS       T01011                                 
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    549283 (wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    549283 (wdr41)
Membrane trafficking [BR:xtr04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    549283 (wdr41)
SSDB
Motif
Pfam: Beta-prop_TEP1_2nd WD40 WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 EIF3I WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_EML_2 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 549283
NCBI-ProteinID: NP_001016529
Xenbase: XB-GENE-1016936
UniProt: A0A8J0PI03
LinkDB
Position
1:complement(185155125..185172580)
AA seq 301 aa
MLRWLLGSREAHNGVEKSAVVDIGEEQTQNPYTELSVLQGHNDIVRFLLQIDESRFASAC
DDGSVFIWDVQTGDILCELRGHTQKITAIVAWGASDILQGKTDIILTASSDKTVIAWDCD
SVQQVQKATDFHSTVKTLLVLQSLDVWLSGGNELRVWNREFNLLCETGYFVDGGISSLIE
LPKNCVAAAIGKDLIIFKLSVASRESDQWDVSEVRCLTAHQDIIRSLITVNDLTFVSGSH
AGELIVWDALDWTFKAVERNFSEILSPQDAPQEIKLLQTPEEISVQHLASDEEVGKTESQ
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgttgcgatggcttctgggaagtcgagaagctcacaatggagtggagaaatctgcggta
gtagatattggggaagaacagacacagaacccttatacagaactgtcagtgctacaggga
cataatgatattgttcgtttccttctgcagatagatgagtccaggtttgcatctgcatgt
gatgatggatcagtctttatatgggatgttcagaccggagatatactgtgtgagctgcgt
ggacatacacagaagatcacagctatcgttgcttggggagcatcggacattcttcaggga
aagacagatataattctgaccgcttcctcggataaaacagtgattgcctgggattgtgac
agtgtacagcaagtgcagaaggcaaccgatttccactccactgtaaagacactgctagtc
cttcagagcctggatgtgtggctgtctggtggcaatgaattgcgtgtctggaaccgggaa
ttcaatctgctatgtgagactggctattttgtggatggtggtatcagctctttgattgaa
ctacccaaaaactgtgtggctgcagccattggcaaagatttaataatctttaaactcagt
gttgccagcagagagagtgatcagtgggatgtgtctgaagtaaggtgcctgactgctcac
caagatatcattcgctcactgataacggtcaatgatctaacctttgtgagtggttcccat
gccggagagctaattgtttgggatgccttagactggacatttaaggcggttgagcgaaac
ttttcagagatcttatcccctcaagatgctccgcaagaaattaaactactgcagacacca
gaggagatttctgttcaacatcttgcatccgatgaagaagtgggtaaaactgaatcccaa
gtctag

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