Xenopus tropicalis (tropical clawed frog): 549308
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Entry
549308 CDS
T01011
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
549308 (rnf4)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
549308 (rnf4)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
549308 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_4
zf-rbx1
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
zf-UDP
zf-C3HC4_4
Rtf2
zf-RING_10
zf-RING_16
zf-RING_6
Zn_ribbon_6
Sina_RING
zf-RING_11
TerY_C
zf-RING_Vps41
zf-ANAPC11
zf-C3HC4_5
IBR_1
DZR
Motif
Other DBs
NCBI-GeneID:
549308
NCBI-ProteinID:
NP_001016554
Xenbase:
XB-GENE-1016982
UniProt:
Q28HV9
A9ULK8
LinkDB
All DBs
Position
1:21718343..21733048
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AA seq
188 aa
AA seq
DB search
MAQRKRKGAEPGHSKSSKRRAPGSTAAMTAATEPIELESGEEVVDLTCESTEPVVVDLTN
NDLSINDSVVIVEDTPRQRRALSRPSQQTTSCVLSSDDEDSRHADHFAANKDISSQAYGS
SRSSSGKVSCPICMDSYSEIVQSGRLIVSTKCGHIFCSQCLRDALKNAPSCPTCRKKLNH
KQYHPIYV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagaaaacgtaaaggagcagagccaggtcactcaaagtcgtccaagagaagg
gcgccaggttccactgccgcaatgacagcggcgacggagcccattgaactggaaagtggg
gaagaagttgttgatcttacgtgtgaatccacggaaccagtcgttgtcgacttgactaac
aatgacttgagtatcaatgactctgttgttattgttgaagatacccccaggcaaagaagg
gctctatctagaccttcccaacaaacaaccagctgtgtattaagtagtgatgatgaagac
tcaagacacgctgaccactttgctgcaaataaagatatttcctcacaagcctatggtagt
tcaagatcttcttcaggtaaagtgagttgtccgatttgtatggatagttattcagagatt
gtacagagtgggcgcctgattgtgtcaaccaaatgtggccatatcttctgcagccagtgc
ctccgtgatgctcttaaaaatgctccttcatgcccaacttgcaggaaaaaacttaatcac
aaacaatatcaccctatatatgtatga
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integrated database retrieval system
