Xenopus tropicalis (tropical clawed frog): 549309
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Entry
549309 CDS
T01011
Symbol
gtf2e2
Name
(RefSeq) transcription initiation factor IIE subunit beta
KO
K03137
transcription initiation factor TFIIE subunit beta
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
549309 (gtf2e2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
549309 (gtf2e2)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
549309 (gtf2e2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_beta
TFA2_Winged_2
TFA2_E-tether
DUF3841
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
549309
NCBI-ProteinID:
NP_001016555
Xenbase:
XB-GENE-962385
UniProt:
Q28HW0
LinkDB
All DBs
Position
1:<83791507..83814754
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AA seq
288 aa
AA seq
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MDPALLRDRELFKKRALTTPAVEKRPSASSESSKKKRAKLEPSGTSGSKPSLDGSNGSFN
LKSLSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGIKQKQWLMSEA
LVNNPKIEIIDGKYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQKAIK
ALGDQIVFVTRPDKKKILFYNDKSCQFTVDEEFQKLWRSVPVDSMDDEKIEEYLKRQGIS
SMQDSGPKKIIPVQKRKKTTSQRRRFKTHNDHLAGVLKDYTDGAPGKS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggatccagccctactaagagacagggagctctttaaaaagcgagccttgaccacacca
gctgtggaaaaacgtccaagtgcttcttcagagtcttcaaagaaaaagagagccaaactt
gaacctagtggcacttcgggatccaagccaagcttagatggcagcaatgggtcatttaat
ctcaagagcctttctgggagttctggatataagtttggggtcctcgctaagattgttaac
tatatgaagactcggcaccagcgaggagacactcatccactaacactggatgaaattttg
gatgaaacacaacatcttgacattggtatcaaacagaaacaatggctcatgtctgaggct
ttggtgaacaatcccaaaattgagattattgatggtaaatatgcctttaagccaaagtac
aacttgaaagacaagaaggctcttctgaggctactagacaaacatgaccaacgaggcctt
ggtgggattctgcttgaagatatagaggaagggcttcctaattcccagaaagccataaag
gcactgggcgatcaaattgtatttgtaacacggccggacaaaaagaaaatccttttctac
aatgacaaaagctgccagtttaccgtagatgaagaatttcagaagttatggaggagtgtc
ccagtagattccatggacgatgagaagattgaagaatacctaaaaaggcagggaatttct
tcaatgcaagactctggaccaaagaaaattattccagtgcagaagaggaagaaaactact
tcacagagaaggaggtttaagactcataacgaccacttggcgggagtgctgaaagattat
acagatggtgctccaggcaaatcataa
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