KEGG   Xenopus tropicalis (tropical clawed frog): 549310
Entry
549310            CDS       T01011                                 
Symbol
pold3
Name
(RefSeq) DNA polymerase delta subunit 3
  KO
K03504  DNA polymerase delta subunit 3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03030  DNA replication
xtr03410  Base excision repair
xtr03420  Nucleotide excision repair
xtr03430  Mismatch repair
xtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    549310 (pold3)
   03410 Base excision repair
    549310 (pold3)
   03420 Nucleotide excision repair
    549310 (pold3)
   03430 Mismatch repair
    549310 (pold3)
   03440 Homologous recombination
    549310 (pold3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xtr01009]
    549310 (pold3)
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xtr03032]
    549310 (pold3)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    549310 (pold3)
Protein phosphatases and associated proteins [BR:xtr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     549310 (pold3)
DNA replication proteins [BR:xtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    549310 (pold3)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      549310 (pold3)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     549310 (pold3)
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 549310
NCBI-ProteinID: NP_001016556
Xenbase: XB-GENE-1017222
UniProt: A0A8J0PI21
LinkDB
Position
2:174998763..175011838
AA seq 214 aa
MDELYLENIDELVADQNKIVTYKWLSHTLGVHVNLAKQMLYDYVTRKRKENGNAQVHVTY
LVTGKCLQDGYPFHKVAVVKEEKLAATKSKLAEVASVHVYSIQKAALKDCAPLFNTDYDI
IKNNLHNCNKFSAIQCPEAVPRSPEEISQLLKANAQPTGEANVTAKPAINGHIAAPAPKP
TSKQPKGIMGMFSQQAVKQQETQKASIKVHNIHG
NT seq 645 nt   +upstreamnt  +downstreamnt
atggacgaactgtacctggagaatatcgacgagctggtggctgatcagaataagatcgtg
acgtacaaatggctgagccacacgctgggcgtccatgttaacctggcgaaacagatgctg
tacgactacgtgacaaggaagcggaaggaaaatggcaacgcacaggtgcacgttacttac
ctggtgaccgggaaatgtctgcaggacggttacccttttcacaaagtggccgtagtgaag
gaggagaagcttgcagccactaagtctaagcttgcggaggttgccagcgtccatgtgtat
agcatccagaaagcggctctgaaggactgcgctcccctcttcaacactgactatgatatc
atcaagaacaacctgcacaactgcaacaagtttagtgccattcagtgcccagaggccgtg
cccaggtccccagaggaaatctcccagctcctaaaagcaaacgcccaaccaaccggagaa
gcaaatgttacagcgaaacctgcaatcaacgggcacattgctgcccccgccccaaagccc
acatccaagcagcctaaaggcattatgggaatgttttcccaacaagctgtcaaacagcag
gaaacgcagaaggcgagtattaaagtccacaacattcatggatga

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