Xenopus tropicalis (tropical clawed frog): 549360
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Entry
549360 CDS
T01011
Symbol
limd1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
549360 (limd1)
03036 Chromosome and associated proteins [BR:
xtr03036
]
549360 (limd1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
549360 (limd1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
549360 (limd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
549360
NCBI-ProteinID:
NP_001016606
Xenbase:
XB-GENE-1017238
UniProt:
B7ZUL2
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Position
6:complement(64976237..65009203)
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AA seq
593 aa
AA seq
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MDTYEELSLEASKFIQDLTLYEASKDGLFRVDKGASNNPEFEETKRIFAAKMAKIHLQNQ
QKNIPDTGTSEGNGSNLQYTYSMPKSVEEVPVTYNGQSSSSVGQSDYKTYRESYKVKPEI
DSADSSEEPVIRHEHEIMLLSPVSKVGHAIPSQQFTCKKAISPSNESLERERIGSENMHS
DLNLSSMINCKPMEKNTPHNKCSPLISSSVIFGEETNTHIPQQKFFNLSSPSSINLQKTS
DHVCLSETKAAKEFNGEQRGFCSTNSLNSGSSNDVKLSALSSYCVGYNENSSDQIKQMQA
PCYTFNSGHSSADEQPQEIPFSCTDSSAEPPASTLDSDHIDIVQDSSTLMKIKLPCQTLS
QSSKQGSSRAEKKLEAITRHLEQEMDAHTRADYFGTCVKCSKGVYGANQACQAMGNLYHN
GCFICSACSRKLRGKAFYFVNGKVYCEEDFLYSGFHQSADRCFVCGHWIMDMILQALGKS
FHPGCFRCAVCNECLDGVPFTVDMENKIYCVKDYHKILAPKCAACSLPILPSEGTDETIR
VVSMDKDYHIDCYRCESCALELNNEDDHRCYPLEGHLFCHNCHLKYLENHNLS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggatacatatgaggaactaagcctggaagctagcaaattcatacaagatctgacttta
tatgaagcttctaaagatggactttttcgtgtggataagggagctagtaacaaccctgaa
tttgaagagaccaaaagaatatttgctgccaagatggcaaaaatccatcttcagaatcag
cagaaaaacattccagacactggcacaagtgaaggaaatggttcaaatctccagtacact
tattcaatgcctaagagtgtagaagaagttccagtcacctataatggtcaatctagttct
tcagtaggtcagtctgattacaaaacatacagagagtcttataaagttaaacctgagatt
gattctgctgatagttctgaagagcctgtgattcgacatgaacatgaaatcatgttactt
agtccagttagtaaagttggccatgctattcccagtcaacagtttacttgtaagaaagct
atcagtccaagtaatgaaagcttggaaagagaaagaattggctcagaaaatatgcatagt
gatctaaatttatcatcaatgataaactgcaagccaatggaaaaaaatacaccacataat
aaatgttcacctttaatatcatcatcagttatttttggagaagaaactaatacacacatt
ccacagcagaaattttttaacttgtcatctcccagctccatcaatttgcagaaaacttct
gatcatgtatgtctgtctgaaacaaaagctgcaaaagagtttaatggggagcagagaggt
ttctgtagtactaattctctaaattctggaagctcaaatgatgtcaaattaagtgcttta
agttcatattgtgtaggatataatgaaaattccagtgatcagataaaacagatgcaagct
ccttgttatacttttaattctggacacagctctgcagatgaacagccacaggagattcct
ttttcttgtacagactcctcagcagaaccaccagcctccaccctagattctgaccatatt
gatatagtgcaggatagctctacgctgatgaaaataaagctaccctgtcagactctctct
cagagttcaaaacaagggtcatctagagctgaaaaaaagcttgaagctataacaagacat
ttagagcaggaaatggatgcccataccagggctgattattttggaacttgtgttaaatgc
agcaaaggagtttatggtgcaaatcaagcttgccaagcaatgggaaacctgtaccacaat
ggttgttttatctgcagtgcctgtagtagaaaacttagaggaaaagcattttattttgtc
aatggtaaagtgtactgtgaagaagactttttgtattctggattccatcaatcagcagac
aggtgctttgtgtgtggacattggatcatggatatgattttacaagcgctaggtaaatca
tttcatcctgggtgcttccgctgtgcggtttgtaatgaatgtttagatggtgtgcccttc
actgtggacatggagaacaagatctactgcgtcaaagattaccacaagattttagctcca
aaatgtgcagcatgcagccttccaattctgccatcggagggcacagatgaaactatccgt
gtagtgtccatggataaagattaccacatagactgttaccgttgtgagagttgtgctttg
gaattgaataatgaagatgaccaccgatgttatcctctagaaggacatttgttttgtcat
aattgtcatttaaaatacttagagaatcataatctgtcataa
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