Xenopus tropicalis (tropical clawed frog): 549365
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Entry
549365 CDS
T01011
Symbol
tob1
Name
(RefSeq) protein Tob1
KO
K14443
protein Tob/BTG
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
549365 (tob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
549365 (tob1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
549365 (tob1)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
549365 (tob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
549365
NCBI-ProteinID:
NP_001016611
Xenbase:
XB-GENE-852943
UniProt:
Q28I92
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All DBs
Position
10:46649669..46657734
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AA seq
310 aa
AA seq
DB search
MQLEIKVALNFIISYLYNKLPRRRVNIFGEELEKLLKNKYEGHWYPDRPYKGSGFRCIHV
GEKVEPIIQQAANESGLEIEDIRRNLPQDLSVWIDPSEVSYQIGEKGQIKVLYVDDNSEN
GTELDKEIKNSFNPEAQAFMPINDQSSSVSSSPSPLFNETAAVSPTFMPRLNQPLTFTTA
MFAATKFGSTKMKNNRNKIARSSPTQFGLNVNLLQQSALSSSMHPMYGIGLPQKPSALSP
NAQEFSFPSIPDPGRPAIGCPNDGTLPYSNAFDMFAAYGGLNDKSLVDGLNYSLNNMQYS
NQQFQPVMAN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgagattaaggtggcactgaattttatcatttcatatttgtacaacaaactg
ccgcggcggcgcgtcaacatatttggcgaagaactggaaaagctgctgaagaataagtat
gaagggcactggtaccccgacaggccctacaaagggtcagggtttcgctgcattcatgta
ggagaaaaggtggagcccatcatccagcaggcagccaacgaaagcggcctggaaatcgag
gacatccgccggaacctcccccaggacctcagcgtctggattgacccgtcagaagtgtcc
tatcagatcggcgagaaggggcagatcaaggttctgtacgtcgacgataactccgagaac
ggcacggaactggataaggagatcaagaacagctttaacccggaggcacaggcgttcatg
ccaatcaatgaccaatcttcttccgtgtccagctccccgtcgcccctttttaacgagact
gccgccgtcagcccgacgttcatgccgagactcaatcagcctctcaccttcaccaccgct
atgttcgctgccaccaagttcggttccaccaaaatgaagaacaaccgcaacaagatcgcg
cgctcctcccccactcagtttggcctgaacgtcaacctgttgcagcagagcgcgttgtct
tcctccatgcaccctatgtacggcatcggcctgccgcagaagccctccgccctctccccc
aacgcacaggagttcagcttccccagtataccggatccaggcagacccgccataggctgc
cccaacgacggaactcttccctacagtaatgccttcgatatgttcgcagcctacggcggc
ctgaatgataaatcgctggtggatggtttgaattacagcctaaacaacatgcagtacagc
aaccagcaattccagccggttatggccaactag
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integrated database retrieval system
