Xenopus tropicalis (tropical clawed frog): 549373
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Entry
549373 CDS
T01011
Symbol
atg4a
Name
(RefSeq) cysteine protease ATG4A
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04136
Autophagy - other
xtr04140
Autophagy - animal
xtr04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
549373 (atg4a)
04140 Autophagy - animal
549373 (atg4a)
04136 Autophagy - other
549373 (atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
549373 (atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
549373 (atg4a)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
549373 (atg4a)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
549373 (atg4a)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
549373 (atg4a)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
549373 (atg4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
549373
NCBI-ProteinID:
NP_001016619
Xenbase:
XB-GENE-922674
UniProt:
Q28IA7
A0A8J0PI25
LinkDB
All DBs
Position
8:complement(52211267..52230063)
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AA seq
395 aa
AA seq
DB search
MDSDPVSDYLKHENEPILEYLDLEELPDSDEPVYILGKQYDMKTEKCNLQSDIVSRLWFT
YRKKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICQHLGRDWRWEKHKEHPEEYRQILQ
CFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNT
VVIEDIKTMCKYQPHSCSMAQAASYQSTWSRCRDASGQSSGWRPLLLIVPLRLGINHINP
VYVDAFKACFKMPQSLGALGGKPNHAYYFIGFSGDEIIYLDPHTTQTFVDTEDQDQTYHC
QKGPNSMKVLNLDPSVALGFFCKDENDFDNWCEVIEKEILKHQSLRMFELTPKHPPHWPP
FIPPTKPEVTTTGAELIESTDKLFDVEEEFEILSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggactccgaccctgtttcagattatttaaagcatgaaaatgaacccattcttgaatac
ttggatctagaagaacttcctgattccgatgagccagtttatattttgggaaagcaatat
gacatgaaaacagagaaatgtaatctccagtcagatatcgtttcccgtttgtggtttaca
tataggaaaaaattctctcctattggaggaacaggcccctcttctgatgcaggatgggga
tgcatgctcaggtgtggacagatgatgctggctcaggctcttatatgccagcacctagga
agagattggcggtgggagaaacacaaagagcacccagaagagtatcgccaaatcctgcag
tgttttttggatagaaaggactgttgttattctattcatcaaatggcacagatgggcgtg
ggagaaggaaagtctataggcgaatggtttggaccaaacacagtggctcaggtcttaaag
aaacttgctttatttgatgagtggaattcactcgctgtctacgtttccatggataacact
gttgtcattgaagacatcaagaccatgtgtaagtaccagccacacagctgcagcatggcg
caggctgcctcctatcaaagcacctggagcagatgtagagacgcatcaggacaaagctca
ggatggaggccactgctgcttatcgtgcctctccgtctagggataaaccacatcaatcct
gtatatgttgatgcttttaaggcatgctttaaaatgccccagtcattaggagctttagga
ggaaaaccaaatcatgcctattattttatagggttttcaggagatgaaataatctacttg
gatcctcataccacgcagacgtttgtagacaccgaggaccaggaccagacgtaccactgc
caaaaaggccctaacagtatgaaggttttgaatctggacccttcagtagcattgggcttc
ttttgtaaagatgaaaatgatttcgataactggtgtgaagtgatagaaaaggaaattcta
aaacatcagagtttacggatgtttgaattaacaccaaagcatccccctcactggccacct
tttatacctccgacaaaaccagaagtgaccactaccggagcagaactcattgagtctact
gataaactgtttgacgtagaagaagagttcgagattctgagtgtttaa
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