Xenopus tropicalis (tropical clawed frog): 549417
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Entry
549417 CDS
T01011
Symbol
cldn4
Name
(RefSeq) claudin-4
KO
K06087
claudin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03272
Virion - Hepatitis viruses
xtr04382
Cornified envelope formation
xtr04514
Cell adhesion molecule (CAM) interaction
xtr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
549417 (cldn4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
549417 (cldn4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
549417 (cldn4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
549417 (cldn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
549417 (cldn4)
04147 Exosome [BR:
xtr04147
]
549417 (cldn4)
Cilium and associated proteins [BR:
xtr03037
]
Other cilia and associated proteins
Stereociliary proteins
549417 (cldn4)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
549417 (cldn4)
Exosomal proteins of colorectal cancer cells
549417 (cldn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM37
DUF7937
DUF7319
SepZ
CdpA_N
Motif
Other DBs
NCBI-GeneID:
549417
NCBI-ProteinID:
NP_001016663
Xenbase:
XB-GENE-972439
UniProt:
Q28IP0
LinkDB
All DBs
Position
2:complement(42439295..42441628)
Genome browser
AA seq
209 aa
AA seq
DB search
MASMGLQVLGIALSVIGWLGTVICCALPMWRVTAFIGNNIVVAQIIWEGLWMNCVVQSTG
QMQCKVYDSLLALPQDLQAARALVVIAVIVAVLALLMAIIGGKCTNCVEDESSKAKVMIV
AGVVFIVAGVLTLIPVSWSANNIIRDFYNPLVVDAQKRELGASLYIGWAAAALLMLGGAM
LCCNCPPRDQKPYSAKYTAARSGATSNYV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatggggcttcaagtcttgggcatcgccctgtccgtcatcggctggctcggc
actgtcatctgctgcgctctccctatgtggagggtaactgccttcattggcaacaacatc
gtggtagcccagatcatctgggagggattgtggatgaactgcgtggtgcaaagtacgggg
caaatgcagtgcaaagtgtacgactctctgctggcccttccccaggatctgcaggcagcc
agagcccttgtcgtgatcgcagtcattgtggccgtgctggcgctgctaatggccatcatt
gggggcaagtgcactaactgcgtggaggatgagtcttctaaagccaaggtaatgattgtg
gccggcgttgtgttcatcgtggctggagtccttaccctcatcccagtctcctggtctgcc
aacaacatcatccgagacttctacaacccgctggtggtcgatgcgcagaagagggaattg
ggcgcatctttgtacataggctgggcagccgctgcgctcctgatgctcggaggggcaatg
ctgtgctgcaactgcccaccaagggatcagaaaccctactctgccaagtacaccgccgct
cgctccggggcaaccagcaactatgtctga
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integrated database retrieval system
