KEGG   Xenopus tropicalis (tropical clawed frog): 549432
Entry
549432            CDS       T01011                                 
Symbol
hoxd1
Name
(RefSeq) homeobox protein Hox-D1
  KO
K09301  homeobox protein HoxA/B/D1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    549432 (hoxd1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    549432 (hoxd1)
SSDB
Motif
Pfam: Homeodomain DUF7255 Homeobox_KN Auxin_canalis
Other DBs
NCBI-GeneID: 549432
NCBI-ProteinID: NP_001016678
Xenbase: XB-GENE-482731
UniProt: Q28IU6
LinkDB
Position
9:65133891..65135965
AA seq 301 aa
MNSYLEYTSCGDVVAFSPKFCRSDQRNMTLQPYPGSGADHPFMPVGGVPGSVAHQASHQS
PALYAPCSLDVAYEPPPPSDYSFLHSSTDYDYYGSNHLVEETGGHIPYGSSVFPGNGSYI
LNGQLSYRTLGEETQMAQIAQCKEPLEVYPGGNLQSISPSPGTYPKPASPASDTHVSTFD
WMKVKRNPPKKSLQSEYGVASPPCTVRTNFTTKQLTELEKEFHFNKYLTRARRIEIANSL
QLNDTQVKIWFQNRRMKQKKREREGSLPNSPPSGPASSICVKTPLSKSVHETATLSPSKD
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaattcctacctagaatacacttcttgcggggatgttgtagccttttcacccaagttc
tgccgcagcgaccaaagaaacatgaccttgcagccttaccctggcagtggagcagatcat
ccctttatgccagttggaggtgtgcctggctccgttgcccaccaggcttctcaccagtct
ccagcactttatgctccatgcagcctagatgtcgcttatgagccacccccaccttctgat
tacagtttcttacatagcagcaccgattacgactattatggatctaatcacttggtagaa
gagactgggggccacattccctatggcagttctgtattcccagggaatggatcgtacatc
ctcaatgggcagctgagctacaggactcttggagaagaaacccaaatggctcaaatcgcc
caatgtaaggaaccactagaagtttatcctgggggcaacttgcagagtatctccccttcg
cctggcacttacccaaaacctgcctccccggcgtctgacacccatgtcagcacgtttgat
tggatgaaagttaaaaggaacccacctaagaaaagtttacaatctgaatatggggtagca
agtcccccctgcaccgtgaggacaaacttcaccaccaaacaactgactgaactcgaaaag
gagtttcattttaacaagtatctcaccagggcaagacgcatcgaaatcgcaaactccctc
caactcaacgatactcaggttaagatctggttccagaataggcgaatgaaacaaaagaaa
agggaaagggaggggtctttgcccaattctcccccgtccggaccagcatccagtatctgc
gtaaaaactccactttcaaagtctgtacatgaaactgcgacgctgtcgccatccaaggac
gtttaa

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