Xenopus tropicalis (tropical clawed frog): 549446
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Entry
549446 CDS
T01011
Symbol
eef1a1
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
549446 (eef1a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
549446 (eef1a1)
03016 Transfer RNA biogenesis [BR:
xtr03016
]
549446 (eef1a1)
03012 Translation factors [BR:
xtr03012
]
549446 (eef1a1)
04131 Membrane trafficking [BR:
xtr04131
]
549446 (eef1a1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
549446 (eef1a1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
549446 (eef1a1)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
549446 (eef1a1)
Translation factors [BR:
xtr03012
]
Eukaryotic type
Elongation factors
549446 (eef1a1)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
549446 (eef1a1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Proteins found in most exosomes
549446 (eef1a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
549446
NCBI-ProteinID:
NP_001016692
Xenbase:
XB-GENE-480094
UniProt:
F6USN7
LinkDB
All DBs
Position
5:91802579..91805404
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKISRKEGSGSGTTLLEALDCILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALS
EAMPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQIGAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagactcacatcaacatcgtcgtcattggacacgtagattctggaaag
tccacaacaactggacatcttatctacaaatgtggtggtatcgacaagagaaccatcgaa
aagttcgagaaggaagctgctgagatgggcaagggctccttcaagtacgcctgggtcttg
gacaaactgaaggccgagcgtgaacgtggtatcaccattgacatctccctgtggaaattt
gagaccagcaaatattatgttactatcattgatgctccaggacacagagacttcatcaag
aacatgatcactggtacctctcaggctgactgtgctgtcctgattgttgctgctggtgtt
ggtgaatttgaagctggtatctcaaagaacggacaaactcgtgagcatgccctccttgcc
tacactctgggagtaaagcaactgatcgttggtgttaacaaaatggattcaactgaaccc
ccatacagccagaaaagatatgaggaaatcgttaaggaagtcagcacatacatcaagaag
attggttacaaccctgacactgttgcctttgtacctatttctggatggaacggtgacaac
atgcttgagcccagcgccaatatgccttggtttaaggggtggaaaatctcacgtaaagag
ggatctggcagcggaactaccctgctggaagctcttgactgcattttgccaccaagtcgc
ccaactgataagcctctgcgtctgcctctgcaggatgtctacaaaattggcggtattggt
actgtaccagttggtcgtgtggagactggtgtccttaagccaggcatggtggttactttt
gcccctgttaatgtaacaactgaagttaaatctgttgaaatgcaccatgaagcccttagc
gaggccatgcccggtgacaatgttggctttaacgtgaaaaacgtttctgtgaaggacgtc
cgtcgtggcaacgttgctggtgacagcaagaatgacccaccaatggaagctggtaccttt
acagcacaggttatcatcctgaaccacccaggccagattggtgctggatatgcccctgtg
ttggattgccacacagctcacattgcttgcaagtttgctgagctgaaggaaaagattgat
cgccgttctggtaagaaactggaagacaatcccaagttcctgaagtctggtgatgctgcc
attgttgacatgatcccaggaaagcctatgtgcgtggagagcttctctgactacccccct
cttggtcgttttgctgtccgtgacatgaggcagactgttgctgtaggagtcatcaaggcg
gtcgataagaaggctgctggagctggcaaagtcacaaagtctgctcagaaagcacagaaa
ggcaaatga
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