KEGG   Xenopus tropicalis (tropical clawed frog): 549490
Entry
549490            CDS       T01011                                 
Symbol
xpa
Name
(RefSeq) DNA repair protein complementing XP-A cells
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    549490 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    549490 (xpa)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     549490 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N DUF3027
Other DBs
NCBI-GeneID: 549490
NCBI-ProteinID: NP_001016736
Xenbase: XB-GENE-977981
UniProt: A0A803KI50 A0A8J0PIA3
LinkDB
Position
1:complement(107443017..107451667)
AA seq 265 aa
MDPELVQEACKEEEKILPAAVRAKIERNRQRALMLRQARLACRPYPTGEGISTVKALPKV
IDSGGGFFIEEEDAEEQHVENVVHQPGPVLECDYLICEECGKDFMDSYLSNHFDLAVCDS
CRDAEEKHKLITRTEAKQEYLLKDCDIDRREPVLKFILKKNPHNSNWGDMKLYLKTQVIK
RSLEVWGSEEALEEAKEVRKDNRDKMKQKKFDKKVKELRRAVRSSLWKKEASGHQHDYGP
EEHVEEDSYKKTCITCGYEMNYEKM
NT seq 798 nt   +upstreamnt  +downstreamnt
atggatccagagttagtgcaagaagcttgtaaggaagaagagaagatacttcctgcagca
gtccgagccaagatagagcgcaataggcaaagagcacttatgctgagacaggccaggctg
gcctgccggccctatcccactggtgaaggtatttctacagttaaagcactgccaaaggta
attgattcagggggaggattttttattgaagaggaggatgcggaggagcaacatgttgaa
aatgtggttcatcaacctggacctgttttggaatgtgattatctaatttgtgaggagtgc
ggcaaagattttatggattcctacttaagcaatcactttgatctagcagtctgcgacagt
tgcagagatgcagaagaaaagcacaaactaataacacgtactgaagccaagcaagagtat
ctactgaaagactgtgacattgacagaagggaaccagttctaaaattcatattaaagaaa
aaccctcacaactctaactggggagacatgaaactttaccttaaaacacaggttattaaa
cgttcactagaagtatggggctctgaagaagctcttgaagaagcaaaggaagtccgaaaa
gataacagagataagatgaaacaaaagaagtttgataaaaaggttaaagaattacgtcgt
gctgtgagaagtagtttatggaaaaaagaagccagtggccaccagcatgattatgggcca
gaagagcatgtagaggaagattcatacaaaaagacatgcataacatgtggctatgaaatg
aactatgaaaaaatgtaa

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