Xenopus tropicalis (tropical clawed frog): 549508
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Entry
549508 CDS
T01011
Name
(RefSeq) uncharacterized protein LOC549508
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
549508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
549508
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
549508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf_UBZ
zf-C2H2_jaz
Zn-ribbon_8
zf-LYAR
zf-C2H2_11
zinc_ribbon_4
C1_4
zf_C2H2_ZHX
zf-CHY
LIM
DUF5830
Elf1
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
549508
NCBI-ProteinID:
NP_001016754
UniProt:
Q28CZ4
LinkDB
All DBs
Position
6:complement(3037447..3058746)
Genome browser
AA seq
400 aa
AA seq
DB search
MSIPDSQKELPSVIKHFKCPECGRRYSSKGSLIIHQRVHTGEKPFMCTECGKSFSKKYGL
VVHQRVHTGEKPFMCTECGKRFTEKNYLIIHQTLHTGEKPFTCTECGKGFSEKRKCVIHQ
RVHTGEKPFTCTECGKCFSVKSGLKSHQRIHTGEKPYTCTECGKSFTLNSHLVRHQRIHT
GIKPFACTECGKSFSAHHKLSLHKRVHTGEKPFTCTECGKSFSAHDKLSLHKRVHTGEKP
FTCTECGKSFSAHHMLSLHKRVHTGEKPFTCTECGKSFRQQTHLEIHQRFHTGEKLYTCT
ECGKSFTVNSNLVRHQKIHTGEKPYTCTECGKSFTVNSHLVRHQKIHTGEKPYTCTECGK
SFTVNSHLVNHQKIHTGIKPFMRMECGKSSSQQSSLRESI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcccgactcccagaaggaacttccctcagtaataaaacatttcaaatgccca
gaatgtgggagaagatactcgagcaaaggcagtcttattattcaccagagagttcacaca
ggggagaaaccattcatgtgcacagaatgtgggaaaagtttctcaaaaaaatacggactt
gttgttcaccagagagttcacacaggagagaaaccattcatgtgtacagaatgtgggaaa
agattcacagaaaaaaactaccttattattcaccagactcttcacaccggggagaagcca
ttcacatgcacagaatgtgggaaaggattttcagaaaaaaggaaatgtgttattcatcag
agagttcacactggggagaaaccattcacatgcacagaatgtggaaaatgtttctctgtt
aagtcaggcctgaaaagccaccaaagaattcatacaggggagaaaccttatacatgcaca
gaatgtgggaaatccttcactttaaacagccatctagttagacaccagaggattcataca
ggaattaaaccattcgcatgcacagaatgtggcaaaagcttctctgcacatcacaagctt
tccttacacaaaagagtccacacaggggagaaaccattcacttgcacagaatgtggcaaa
agcttctctgcacatgacaagctttccttacacaaaagagtccacacaggggagaaacca
ttcacttgcacagaatgtggcaaaagcttctctgcacatcacatgctttccttacacaaa
agagtccacacaggggagaaaccattcacttgcacagaatgtgggaaaagcttccgtcaa
cagacacaccttgaaatacaccagaggtttcacacaggggagaaactttatacatgcaca
gaatgtgggaaatccttcactgtaaacagcaatctagttagacaccagaagattcataca
ggggagaaaccttatacatgcacagaatgtgggaaatccttcactgtaaacagccatcta
gttagacaccagaagattcatacaggggagaaaccttatacatgcacagaatgtgggaaa
tccttcactgtaaacagccatctagtcaaccaccagaagattcatacaggaataaaacca
ttcatgcgtatggaatgtgggaaaagctcttcgcaacaaagttcccttagggaatctatt
tga
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