Xenopus tropicalis (tropical clawed frog): 549538
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Entry
549538 CDS
T01011
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
549538 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
549538 (snrpa)
Spliceosome [BR:
xtr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
549538 (snrpa)
Complex B
549538 (snrpa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
RRM_MUD2_C
Eap1
Motif
Other DBs
NCBI-GeneID:
549538
NCBI-ProteinID:
NP_001016784
Xenbase:
XB-GENE-494246
UniProt:
Q5BL54
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All DBs
Position
8:78499526..78506300
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AA seq
282 aa
AA seq
DB search
MAVQEVRPNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK
EISSATNALRSMQGFPFYDKPMRIQYSKSDSDIIAKMKGTYVERDRKRQEKRKVKGQEAP
GVKKALPGAALLPGVPGQMAGMQNIPGMTQAPRMMHMAGQAPYMHHPGMMPPPGMAPGQI
PPGGMPHGHLMPGQMAPMQPISENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFDNEVQAGAARESLQGFKITQSNSMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcaagaagtcaggcctaataacacaatctacatcaacaacctgaatgagaaa
attaaaaaagatgagctaaagaagtctctttatgccatattctcacagtttggtcagatt
ctggatatcttggtgtctcgcagcctgaagatgagaggacaggcttttgttatatttaaa
gaaataagcagtgccacaaatgctctgaggtcaatgcaggggtttcccttttatgataaa
ccaatgagaatacaatattcaaaatccgattctgacatcattgccaaaatgaaaggtacc
tatgtggaaagagacagaaagaggcaggagaagaggaaggtgaaaggccaggaagctccg
ggtgttaaaaaggctttaccaggtgctgcgttgcttccaggcgttccaggacagatggcg
ggcatgcaaaatatacctggtatgactcaagctccacgcatgatgcatatggctgggcag
gcaccctacatgcatcaccctggtatgatgccaccaccagggatggcaccaggacagatc
ccaccaggaggcatgccccatggacacctgatgcctgggcagatggcacccatgcagcca
atttctgaaaacccacctaaccacatcctcttcctcaccaaccttccagaggaaacaaat
gagctaatgctatctatgctgtttaaccaatttcctggtttcaaggaagttcgacttgtc
cctggccgccatgacattgcttttgtggaattcgataatgaggttcaggcaggagctgct
cgcgagtctcttcagggattcaagatcacacagagcaactccatgaagatttcatttgct
aagaaataa
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