Xenopus tropicalis (tropical clawed frog): 549603
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Entry
549603 CDS
T01011
Symbol
tcirg1
Name
(RefSeq) V-type proton ATPase 116 kDa subunit a isoform 3
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00190
Oxidative phosphorylation
xtr01100
Metabolic pathways
xtr04142
Lysosome
xtr04145
Phagosome
Module
xtr_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
549603 (tcirg1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
549603 (tcirg1)
04142 Lysosome
549603 (tcirg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
549603 (tcirg1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
549603 (tcirg1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
V_ATPase_I
SKA2
DUF7491
CAP18_C
Motif
Other DBs
NCBI-GeneID:
549603
NCBI-ProteinID:
NP_001016849
Xenbase:
XB-GENE-5721917
UniProt:
Q28DM4
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Position
7:57726817..57800202
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AA seq
823 aa
AA seq
DB search
MGSLFRGEEMCLAQLFLQSGSEYQCVSALGELGLVEFRDLNQNVNSFQRRYVSEIRRCDE
METTFSYLERELRKAGVQVPESEMSPPAPLPRDAIRMQEESEQLAKELREVSQNRQTLQE
RLRELLEYANILRESQRFTGPLLESEAQWKDRSEDDPLLDPAVVNKQDLRVSFMAGVIHP
WRMNSFERLLWRACRGYLIVNFVEMSEPMEDLVTGESVTQIIFLISYWGEKIGEKIKKIA
NCFHCHIYPYADDETSRLETLRNLLVQIQDMQKVLLQTEGYLSQVLSRAASALHHWRVSV
RKMKHIYLILNLCSVRERCLIGEVWCPVVDLPLLQSALTRASESSGGGGESFCHRIPCAF
SPPTLIRTNKFTSGFQGIVDAYGVATYQEVNPAIFSIITFPFLFAVMFGDVGHGAIMFLF
ALWLVLGENDPKLRRSEDEIFSMCFGGRYLILLMGALSVYTGFVYNECFSRPAVIFNSGW
SVASMARANNWTSDSINKLPPIPLNPNITGVFTAPYPFGIDPIWSLAVNRLTFLNSFKMK
MSVILGVCHMAFGVCLSVFNFVHFRQIYRIFLITLPELLFLLCLFGYLVFMVVYKWIVLT
AEDAEWAPSILIHFIDMFLFTQNPGNRDLYQGQQVVQTVLVIVAILCIPVLLLGDPICLL
IQHRSKKDSSHQNRCSLNNGDREALLEDEITVPTGHGHGSEKFDTAEVFMHQMIHTIEYC
LGCISNTASYLRLWALSLAHAQLSEVLWNMVIRIGFSKLSLTWGIVLVPIFAFFAVLTVA
ILLIMEGLSAFLHALRLHWVEFQNKFYSGEGYKFFPFCFETMY
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgctatttcggggagaagagatgtgcctagcacagttatttctgcagtctggt
agtgagtatcaatgtgttagtgcactgggagaacttggactagtggaattccgggatctc
aatcaaaatgtcaattcctttcagcgccgatatgtatcagagataagacgttgtgatgaa
atggagacaacattctcatacctagaacgagaattgcgtaaagctggagtacaagttcct
gagtctgaaatgtctccgcctgctcccttaccgagagatgccatcagaatgcaagaagaa
tctgagcagctggcaaaagagcttagagaggtgtctcaaaatcgacagactctacaagag
cgtttgagagagctactggaatatgccaatatccttcgggagagccagagatttactggg
ccactgctggagtctgaagcacaatggaaggacaggtctgaggatgatccactgctggac
cctgctgtagtcaataaacaagacctcagagtcagctttatggcaggtgttattcaccca
tggcgcatgaactcatttgaacgtttgttgtggcgggcttgccgtggttacctgattgtc
aactttgtagaaatgtcagagccaatggaagatttggtgactggtgagagtgtcactcaa
attatatttctaatttcctactggggcgaaaaaattggagagaagatcaaaaagattgca
aactgttttcactgtcatatttatccgtatgctgatgatgaaacttcacgccttgagaca
ctaagaaatcttctggttcagattcaagacatgcaaaaagtgttgttacagacagaaggt
tacctctcacaagtactttcccgagctgcatcagctctgcaccactggagagttagtgtg
cgaaagatgaaacatatttatctcattctgaacttatgcagtgtacgggagcgttgcctg
attggtgaagtgtggtgtcctgtggttgatcttccccttcttcaaagtgcacttacccgg
gcgtcggagagcagtggaggcggtggagagtctttctgtcatcgaataccttgtgctttt
agccctccaactcttattcgtaccaataaattcacttcaggtttccagggaattgttgat
gcttatggagtagccacatatcaggaggtgaatccagctatcttctcaatcataacgttt
ccattcctgtttgctgtgatgtttggggatgtgggacatggtgcgatcatgttcctcttt
gctctctggctggttcttggtgagaatgatccaaaacttagacgttctgaagatgagata
ttttcaatgtgtttcggggggcgttaccttatcctgctgatgggagcactctcggtatac
acagggtttgtgtataatgagtgtttcagtcgaccagctgtcatttttaactcaggatgg
agtgttgcttctatggcaagagccaacaactggacgtcagactcaataaataaattgcct
ccaattcctctgaaccccaacattactggtgtgtttactgcaccatatccatttggcatt
gatcctatctggagtcttgcagtaaatcgacttactttcttgaactccttcaagatgaaa
atgtctgttattttgggtgtttgtcacatggcatttggtgtctgcctaagtgtctttaac
tttgttcactttaggcaaatataccgcattttcctcataacccttccggaattgttgttt
ctactttgtctctttgggtacctggtttttatggtggtgtataaatggattgtgctgaca
gctgaggatgctgagtgggctccaagtatacttatacattttatagacatgttcctgttt
actcagaaccctggaaacagagatttgtaccaggggcagcaagttgtgcagacagtttta
gtgattgttgctatactatgcatcccagttctgttgctgggggatccaatatgtctcctt
attcagcatcggagtaaaaaagacagctctcatcagaatcggtgctcgctgaataatggg
gatcgagaagctctactggaagatgagattacagtacccacaggacatggacatggcagt
gaaaagtttgatacagctgaagttttcatgcatcaaatgattcatactatagagtactgt
ctgggctgcatatctaatacagcctcttaccttcgactgtgggcgctcagcttggcacat
gcacagctgtctgaggtcctgtggaatatggtgattagaattggattctccaagttatcc
ttaacatggggcattgttcttgttccaatctttgctttttttgctgtcctgacagtcgcc
attttgcttattatggagggactgtctgcttttttacatgctctccgtctgcactgggtg
gagttccaaaacaaattttattctggtgaaggatacaaattctttcccttttgctttgag
acaatgtattga
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