Xenopus tropicalis (tropical clawed frog): 549626
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Entry
549626 CDS
T01011
Symbol
rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
549626 (rnf170)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
549626 (rnf170)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
549626 (rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
Prok-RING_4
zf-ANAPC11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
549626
NCBI-ProteinID:
NP_001016872
Xenbase:
XB-GENE-5789582
UniProt:
Q28DS3
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All DBs
Position
1:complement(113041176..113063275)
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AA seq
257 aa
AA seq
DB search
MADNQEGRPYFPLDEGSIIEGVSDQVIVVVLLSFVAVGSLLYLLLRNDEQNIHPENQDRV
RAVREQLQNEQETPPPPRPQFYSDMTCPVCLQQATFPVETNCGHLFCGSCIIAYWRYGSW
LGAINCPICRQTVTLIFPLFQATEQEDSQNILREAIGYNRRFSGQPRSLMDRIMDLPTLL
RHAFREMFSVGGLFWMFRIRIVLCLLGALFYLVSPLDIIPEAVFGLLGFLDDFFVLFLLL
IYISIMYREVVTQRLYR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatcaggaaggacgtccttattttccattagatgaaggctcaatcattgaa
ggagtaagcgatcaagtgattgttgttgttttactcagctttgttgctgttggttcactt
ttatatctgcttttaagaaatgatgagcaaaacattcacccagaaaatcaagacagggtc
agagctgttcgtgaacagttgcaaaacgaacaagaaactcctcctccacctcgccctcag
ttctactctgatatgacatgtccagtgtgtttacaacaagctacatttccagtagaaaca
aactgtggacatcttttttgtggctcatgtattattgcctactggaggtatggttcatgg
cttggagcaatcaactgtcctatttgccgtcaaacggtgacattaatatttccattgttt
caagcaacggaacaggaagactcccaaaatatactccgggaagccattggttacaatcga
aggttttcaggacaacctcgctctctcatggacagaattatggatttgcccactttgctg
cgccatgccttccgtgagatgttctctgttggtgggctgttttggatgttccggattaga
attgtcctgtgtctgcttggagccctattctacctggtttcacccttggacattattccc
gaggctgtttttggtcttcttggatttctggatgatttctttgtattatttttattacta
atatacatctccattatgtatcgagaagtggtgacacagagattgtatagatga
DBGET
integrated database retrieval system
