Xenopus tropicalis (tropical clawed frog): 549638
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Entry
549638 CDS
T01011
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
549638 (pus7)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
549638 (pus7)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
549638 (pus7)
Prokaryotic type
549638 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
549638
NCBI-ProteinID:
NP_001016884
Xenbase:
XB-GENE-5812368
UniProt:
Q28DV4
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Position
3:complement(77100224..77132332)
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AA seq
649 aa
AA seq
DB search
MESIEMASVSLKRPIASEDLSGDSVKRQKVSTETSLKAQYVEHSSGIQNENTLDRELTLE
VPAEKNEKEDIEEAELLDGETEEESPESFADMMKHGLTEIDVGITKFVSTHEGFSGILKE
RYSDFVVHEIGKEGKVIHLNDLSVPADEEDPSQEIYSVLSPEDKKRLEELQLFKNREDNV
EIEVVEDTKEKRTYIHQAVKGLFPGLETKTEEREGKKYIIAYHAAGKKALSNPRKHSWPK
ARGSYCHFVLYKENKDTMDAINVLSKFLRIKPNIFSYMGTKDKRAITVQEIAVLKITAQR
LAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNVTGTSEQIVQAMTSLRDIGFI
NYYGMQRFGTTAVPTYQVGRAILQSNWNEMVDLILKPRPGAEKGYLVQCREEWAKTKDPE
AALRKLPVKRCVEGQLLRGLSMYGLKNIVSAFGIIPRNNRLMYIHSYQSYVWNNMVSKRI
EEYGLKVVPGDLVLKGDTAVPVEEGNVDSYTINDIVMPLPGFDVIYPKHKVAAAYEEILA
ADNLDIKNMRHRVKDYSLAGAYRKIVIRPQDVSWEVVSYDDPKIPLVQTDLDKLEGKALP
EYKTEGKYRALKMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTVWLR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaatccatcgaaatggcttctgtttctctaaaacgccctattgctagtgaagacctt
agcggtgattctgtaaaaaggcaaaaagtctcaacagagacttctttaaaagcacagtat
gtggaacattcttcaggtattcagaatgaaaacaccttagatagagaacttacacttgaa
gtgccagcagagaaaaatgagaaagaagatattgaggaagcagagcttctggatggggaa
actgaagaagaaagtccagaaagctttgcagacatgatgaagcatggccttactgaaatt
gatgtcggcattactaaatttgtaagcactcatgaagggttttctggcattttaaaagaa
agatactcagactttgttgtccatgaaataggaaaagaaggcaaggtcattcatttaaat
gacctttcagtaccagcagatgaagaggatccttctcaagaaatatattctgttctctcg
cctgaggataagaagcgtttggaagaacttcagttatttaagaatagggaagataatgtt
gaaattgaggttgttgaagacactaaagaaaagagaacatatatccaccaagctgtgaag
ggtctgtttccagggcttgagactaaaacagaggaaagggaaggaaagaaatacatcata
gcttaccatgctgctgggaagaaagccttatcaaatccacggaagcattcctggccaaaa
gccagaggaagctactgccattttgttttatacaaggaaaacaaagacaccatggatgcc
attaacgtgctctcaaaatttttaagaatcaagccaaatatattttcctatatgggcacc
aaagataaaagggctatcactgttcaagaaattgcagttcttaaaattacagcacagagg
ctagctcatctaaacaagtgcttgatgaatttcaaattgggaaacttcagttaccaaaaa
aatccactgaaattaggtgaacttcaaggaaatcattttactgtggtgttaagaaatgtc
actgggacaagtgaacaaattgtgcaagccatgacttctcttagggatattggatttata
aattactatggaatgcagagatttggaaccacagctgtgcctacttaccaagttggaagg
gctattcttcagagtaactggaatgagatggtagatttaatattaaaaccaaggcctgga
gcggaaaaaggatatctggttcagtgcagagaagagtgggctaaaaccaaagatccagag
gctgctcttagaaaattacctgttaagagatgtgtggaaggtcagctactgcggggactt
tcaatgtatggtctcaaaaacatagtttctgcatttggcataatcccaaggaacaaccgt
ttaatgtatatccacagttatcagagttatgtttggaataacatggtaagcaagaggatt
gaggagtatggactcaaagttgttcccggagacctagtgctcaaaggagacactgctgtt
ccagtagaagagggcaatgttgatagttatacaattaacgacatagtaatgccattgcca
ggctttgatgtaatctaccctaagcacaaggttgctgcagcttatgaagaaattctcgca
gcagacaatcttgatatcaaaaacatgaggcacagagttaaggattattcattagctgga
gcctataggaaaatagttatccgtccacaagatgtcagctgggaagttgtatcatatgat
gaccctaaaatacctctagttcaaacagatctggataaactggaaggaaaggcacttcca
gaatataaaacagaaggaaaatacagagcactgaagatggaattctccttgccaccttct
acgtatgcaacaatggctatcagagaagttcttaaaatggatacaagcatcaaaaaccag
acccagctgaacactgtctggcttcgataa
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