Xenopus tropicalis (tropical clawed frog): 549665
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Entry
549665 CDS
T01011
Symbol
mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120
Ubiquitin mediated proteolysis
xtr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
549665 (mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
549665 (mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
549665 (mgrn1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
549665 (mgrn1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
549665 (mgrn1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
549665
NCBI-ProteinID:
NP_001016911
Xenbase:
XB-GENE-963240
UniProt:
A0A8J0PJ16
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Position
9:complement(199401..216925)
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AA seq
508 aa
AA seq
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MGAVWGRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFETPHPEGYLFGENSDL
NFLGNRPVQFPYLTPAPHEPVKTLRSLVNIRKDSLRLVRYKDGADSPLEEGGTPRVLYGL
EFTFDADARVAVTVYCQASEEFSGGVAVYSPRSPALQSQTVYYKRGLSQHFSLTSFKIDF
SDWKDEELNFDLDKGIVPLVIQAVVAEGGEGSAHAHVLLAAFEKHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQDTKQSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRRKPGPLPPISFSPVLAQSLDHDDSTGADNLPP
GYEPISLLEALNGLRSPPPSAPLYEEIPYSEGLPARVPPESTHHKAKHIKSTDSGLRSPS
SPIHEEDEEVSAVSDGERPALLGSVSRDPSHTENVTATPEITSTHGGSRIQSPPEVHKEV
SDALELKEEGTQEGTALGPDACSIGIDE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgtgtggggccggaggatcgcaggggtagaagacattgatattcaggccaat
tccgcgtatcggtacccgcccaagtccgggaactactttgccagtcacttctttatggga
ggagagaagttcgagaccccgcaccctgaaggttatctctttggggagaatagtgacctc
aacttccttgggaaccggcctgtgcagtttccgtacctcacccccgcccctcatgagcca
gtgaaaactctccgcagcctggttaatatacgcaaggactccctgcgcctggtcaggtat
aaagatggcgctgacagccccctggaggagggggggactccgcgggttctgtatgggctg
gagttcacctttgatgccgacgctcgtgtggcggttaccgtatattgtcaggccagcgag
gagttctctgggggcgttgcagtgtacagcccccgcagccccgccctgcagtcccaaact
gtgtattacaagcgcggcctcagccaacacttctctctcacctccttcaagatcgacttc
tccgactggaaggatgaagagctgaactttgatcttgacaaagggatcgttccactcgtt
atccaggctgtggtggctgagggaggagaaggatctgctcacgctcatgtgctcctggcg
gctttcgagaagcacgtggatggcagtttttcagtgaagcccctaaagcagaagcagatt
gtggatcgggtcagttacctgttgcaggagatttatgggattgagaataagaataaccag
gacacaaagcagtcggatgatgagaacagcgataacagcaacgagtgtgtggtgtgtctg
tccgacctgcgggacaccctcatcctgccctgccggcacctctgtctgtgcaactcttgt
gccgacaccctgcgctaccaggccaacaactgccccatctgccggctgccgttccgtgcc
cttctgcagatccgcgctgtgcggagaaagccggggccccttccccccatttccttcagt
cctgttctggctcagagcctggatcatgatgacagcactggtgctgataacctgcccccg
gggtatgaacccatatccttgctggaagccttgaatggactgcgctcccccccacccagt
gctcctctctatgaagaaattccctacagtgaggggcttccagcccgagtccccccagag
agcacacaccacaaagccaagcacattaaaagcaccgacagtggtctacgttccccctcg
tcgcctatccatgaggaggatgaagaggtgtcggctgtatctgacggtgagaggccggct
ctcctggggtcggtcagcagagacccctcccacacagagaacgtgactgctacacccgag
atcacctctactcatggagggtctcgtattcagtccccccctgaagtgcacaaagaagtt
tcagatgccctcgaactgaaggaggagggaacccaggagggaacagctctgggccccgat
gcttgctccattgggatagatgagtga
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