Xenopus tropicalis (tropical clawed frog): 549714
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Entry
549714 CDS
T01011
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
549714 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
549714 (vti1b)
Membrane trafficking [BR:
xtr04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
549714 (vti1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
ATG17_like
Laminin_II
GAT
COG5_N
DUF2019
DUF5856
Fusion_gly
Acetyltransf_11
Motif
Other DBs
NCBI-GeneID:
549714
NCBI-ProteinID:
NP_001016960
Xenbase:
XB-GENE-957754
UniProt:
Q28GI4
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All DBs
Position
2:complement(74812933..74822639)
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AA seq
221 aa
AA seq
DB search
MSSEQYEKLHELYKELYTKLQEIQERLQSCYGEEKKKLLREFSEKQKEANEMLSEMEYEL
KSAPPTFRHQAAGQLRAYKRDLVKLQMEANYNALEVSTKERETYSVENEHSTRLESQRAL
LLQGTESLNRATDSIARSHRIAAETDAIGTDIIEELGEQREKLERTKGRLVGTSENLSKS
RKILRSMSRKIVTNKLLLSIIIILELAILGGLIYYKFFSKR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgagcaatatgagaaactccatgagctctacaaagagctatatactaagcta
caagaaatccaggagagactgcagagctgctatggagaggaaaagaaaaaactgcttaga
gaatttagtgaaaagcagaaggaagcaaatgaaatgctgagtgagatggaatatgaatta
aaatctgctccaccaacttttcgtcatcaagcagcaggtcaattaagagcctacaaaaga
gatctggttaaacttcagatggaagcaaattataatgcgcttgaagttagcaccaaagaa
agagaaacctacagtgtggaaaatgagcatagtacacgcttagaatcccaaagagcactt
cttctccaaggcactgaaagcttaaacagagcaacggacagtattgctagatctcatcgt
atagcagctgaaactgatgccattggcacagatattatagaggagctaggcgaacagaga
gaaaaattggagaggaccaaaggacggttggtgggcacaagtgagaatcttagtaaaagc
cgaaaaatcctgcggtccatgtcacggaaaattgtgacaaacaagcttctgctgtcgatc
ataattattcttgaactagcgatccttggtggcttaatctactataaattcttcagcaaa
cgctga
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