KEGG   Xenopus tropicalis (tropical clawed frog): 549724
Entry
549724            CDS       T01011                                 
Symbol
polr3e
Name
(RefSeq) RNA polymerase III polypeptide E
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03020  RNA polymerase
xtr04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    549724 (polr3e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    549724 (polr3e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    549724 (polr3e)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     549724 (polr3e)
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 549724
NCBI-ProteinID: NP_001016970
Xenbase: XB-GENE-998798
UniProt: Q28E53
LinkDB
Position
9:25083680..25118585
AA seq 697 aa
MENEDDDPIIQEIDVFLAKSLSEKLYLFQYPIRPASMTYDDVTHLSTRIKPKQQKMEMEI
AINTVSPNYCRSKGEQIALNVDGTSNDDTSTYSTKLMDKQIFSSIQAASNTTRYAAALYR
KGEIHLTPLHGILQMRPSFTYLDKADTKFKEREAANEGGDSSQDEVEDDIKQVTVRFSRP
ESEKAKQRRAQSYEFLQKKQAEETWVHLHYSGVKDSRSEHERQYLLCQNTSVADNMELTK
SPRDYLSMLMPPDVEEEKEKPVAPSNVLSMAQLRTLPLGDQIKILMKNVKVMPFANLMGL
MAAGTESINVLRCIQQVAMLVQGNWVVKSDVVYPKESSSPHSGVSADVLCRGRDFVMWRF
TKSRWVVRKEIAAVTKLCQEDVKEFLDHMSIPRINKGWEFMLPYDEDFVKKHPDVVERQN
MLWKGIESKLKKVFSISNEDLVSRKQDTSSAPSVVIPGDQLVNIAKAKATENQAQLERTL
QKKKEQSKQTSSTVTVLADVHIKEEPVSDEEPMDTSACDSLSNGMVNGIHMDESSRESVN
GHTPRGDGDLVTKELKEFVATTFNKQYVLTLRELKRLFNLHLASLPPGHILFSGISDKML
QETVLNTGCKQIKVPSTATPEEQKVFALWECGDSHDQLRQELLDLFLTGHRLRRNLIQTK
LSQKFGDALNKQQVDKVLKDCCVCYGGMWYLKGTVQS
NT seq 2094 nt   +upstreamnt  +downstreamnt
atggaaaatgaagatgacgatccaattatacaagagattgatgtgtttttggctaaaagc
ttgtcagaaaagctctatttattccagtaccctatacgccctgcatcgatgacatatgat
gacgtcacacatttatcaacgaggattaaaccaaagcaacagaagatggaaatggaaatt
gccattaatacagtgagtccaaattactgtcgcagcaaaggagagcagattgctctaaat
gtcgatggtacatctaatgatgacacaagcacctactcaacgaaactaatggataagcag
atattctcctctatacaagctgcaagcaacaccactcgctatgcagcagctttatatcgg
aaaggtgaaattcatttgactcctcttcatggaattctgcaaatgcgtcccagcttcact
tacttggacaaagctgacactaaatttaaagagagagaagctgccaacgaaggtggagat
tcctcgcaggatgaagttgaggatgacataaaacaagtgaccgtgcgtttctcccggcca
gaatctgaaaaagccaagcagcgcagagcccaatcctatgaattcctgcaaaagaagcag
gctgaggaaacctgggtccatcttcactattcgggtgtaaaggacagtcgctcagaacac
gagcgtcagtatttgctttgccagaataccagcgtggcagacaatatggaactcactaaa
tccccaagggattatctgtcaatgctgatgcctccagatgttgaagaggaaaaggagaag
cctgtagcaccaagcaatgtgctctctatggcccaactaagaactttaccattgggtgac
cagataaaaatactaatgaaaaatgttaaggttatgccctttgcaaacctcatggggctg
atggctgctggtacagaatccattaatgttctgcgatgtatacagcaagtggccatgttg
gttcagggaaactgggtggtaaagagtgatgtggtttatccaaaggagtcctctagtcct
cacagtggagtgtcagcagatgtgctttgtcgtgggagagactttgttatgtggagattc
acaaagtctcgctgggtcgtgaggaaagaaattgcagcggtgacaaaactttgccaggaa
gatgtgaaagaattcttggatcatatgtctattccacggatcaacaaaggctgggaattc
atgttgccttatgatgaagactttgtgaaaaagcatccagatgtggtcgagaggcagaac
atgctgtggaaaggaattgaatctaaattaaaaaaggtatttagcatttcaaatgaagat
ctggtatccaggaaacaagacacgtcctcagcgccatctgtagtgatacctggggaccag
ctggttaacattgcaaaagcaaaggccacagagaaccaagctcagttggagaggaccttg
cagaagaagaaagagcaaagcaagcaaacttcttccactgtaacggttctggcagacgtt
catatcaaagaagagccggtgagcgacgaggaacccatggacacctctgcctgtgacagt
ctgagcaatggaatggtcaatggtattcatatggatgagagttctcgtgagtcggttaat
ggtcacaccccgagaggcgacggagatcttgtaacaaaagaactgaaggagtttgtggct
acaacattcaataaacaatatgttttgaccttgcgagaacttaaacgtttatttaatctg
catttagccagtcttcctcctggacatattctgtttagtggcatctcggataaaatgttg
caagaaacggttttaaatactggatgcaaacagattaaggtgcctagcacagctacaccc
gaggaacagaaggtgtttgcattgtgggagtgtggagactctcatgaccagctccgacag
gagctgcttgatttgttcctgacgggacatcgcttgcgcaggaacttgatccagacgaag
ctgagccagaagtttggagacgctctcaataaacagcaggtggacaaggtgttgaaggac
tgttgtgtatgttatggaggaatgtggtatcttaaaggaacagtgcagtcttga

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