Xenopus tropicalis (tropical clawed frog): 549754
Help
Entry
549754 CDS
T01011
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00450
Selenocompound metabolism
xtr00970
Aminoacyl-tRNA biosynthesis
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
549754 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
549754 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xtr01007
]
549754 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
549754 (mars1)
Enzymes [BR:
xtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
549754 (mars1)
Amino acid related enzymes [BR:
xtr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
549754 (mars1)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
549754 (mars1)
Prokaryotic type
Other AARSs
549754 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C
Anticodon_1
GST_C_2
DUF5382_C
Motif
Other DBs
NCBI-GeneID:
549754
NCBI-ProteinID:
NP_001017000
Xenbase:
XB-GENE-5952509
UniProt:
B4F6J9
LinkDB
All DBs
Position
2:140535522..140578282
Genome browser
AA seq
905 aa
AA seq
DB search
MKLFVGEGNPHGVKVLAAAALWAEHVHINRLQQEEKIVPFMSQPRLPALDLENGNYLFLS
NAVCRYFYLSSGHDVCNLSNQWLEWEAVELQPAFSAALYAHVVQGRKKEEVIASLSASLS
HLDQSLAGKPSPYLVKDALTVADIVVWGSLYPLIEDASSLPEEMKLLKHWFQTVSQLEQC
QKAVSFLMKDGGSSVFKPYLQKQPVPITPSGKPTCNEHEGEDMASLSEEDIQAAANAWAK
GLTGAQKPKQRLHPILPVEGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRN
WNTLYICGTDEYGTATETKAMEEGLTPQQICDKYNAVHTAIYQWFDISFDFFGRTTTQHQ
TTIAQDIFHRLLKRDFLLTDTVEQLRCETCQRFLADRFVEGTCPFCNYEEARGDQCDKCG
KLINAVELKKPQCKVCKKSPVKKSSKHLFLDLPKLEKRLEQWLEKSFSSGDWTSNARFIT
RSWIRDGLKPRCITRDLKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWEKWWKS
TQQVQLYHFMAKDNVPFHSVIFPSCLLGAEDNYTLVNHIIATEYLNYEDGKFSKSRGVGV
FGDMAKDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMFVQ
KFFNGCVPEMELLSEDKRLLAQVAAELQQYNQHLEKVRIRDALRCILNISRHGNQYIQVN
EPWKCIKGNQQEQKRAGTVTGVAVNMAALLSVMLHPYMPTVSGLIQEQLLMPQESKVLTT
DFCCRLQSGHQIGNVSPLFQKLENDQIESLRKRFGGGQVKTESKAPPCQEAPLKEAPKAS
GPERVKELMQEVEKQGNLVRELKGKKAEKSTIDTEVQKLLALKKELALAEGKSPDPPAQK
GKKKK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgttcgtgggcgaggggaaccctcatggggtgaaggtgttggctgctgccgct
ctctgggctgaacatgtacatatcaacaggctacagcaggaagaaaagattgttcctttt
atgtcacaaccaagactgccagcactggacttggaaaatggaaattatctcttcttatct
aatgcagtctgcagatacttctacttgtcatctggtcatgatgtgtgcaatctaagtaat
cagtggttggaatgggaagcagtcgagcttcagccagcattttctgctgcattatatgca
catgtggttcagggaaggaaaaaggaagaagttatagcatctctcagtgcatcacttagt
catctggatcaaagccttgcaggaaagcccagtccgtaccttgtcaaagatgcactcact
gttgctgatattgttgtgtggggctctctctatcctcttattgaggacgcgtctagtctg
ccagaagagatgaaattacttaagcattggtttcaaactgtaagtcagctagaacagtgc
cagaaagctgtatcattcctaatgaaagatgggggttcttcagtcttcaagccttacctc
cagaagcagcctgtacccattaccccatctggcaaaccaacctgcaatgagcatgaggga
gaggacatggcatctctgtctgaggaggatattcaagctgctgctaatgcttgggctaaa
ggtctcactggtgctcaaaagccaaagcagcgactccacccaatcctgcctgtggaagga
gaaaaaaatgtacttatcactagtgcgctgccctatgtgaataacgttccgcaccttgga
aatatcattggttctgtgctcagcgctgatgtttttgctaggtactgcaggctgcgcaac
tggaacactctatacatatgcggaacagatgaatatggcacagccacagagaccaaggct
atggaggaaggtttaacaccccagcagatctgtgacaagtacaatgctgtgcacactgct
atatatcagtggtttgacatctcttttgacttttttggacggacgacaacccagcaccaa
accactattgcccaggacatcttccatcgacttcttaagagggactttctactgaccgac
actgtggaacagcttcgctgtgagacatgccagaggtttttggctgatcgctttgtggaa
ggaacatgtcctttctgcaactatgaagaggctagaggagaccagtgtgacaaatgtggg
aagctcataaatgctgtagaattaaagaaaccacaatgcaaagtttgtaagaagtcccct
gtcaaaaaatcctccaagcatctctttttggaccttccaaagctagagaagcgtttggag
caatggttggaaaagtccttctcatctggagactggacatcaaatgcccgttttataact
cgctcatggatacgtgatggactgaagcctcgttgcatcacacgggatctgaaatggggc
acgcctgtgccactggatggtttcagagacaaggtgttctatgtctggtttgatgctccc
attggctatatttctatcacagccaactatacagatcagtgggaaaagtggtggaagagt
actcaacaggtccagctttatcatttcatggcaaaggacaatgttccctttcacagtgta
atcttcccttcctgccttttgggtgcagaagataactacacgctggtcaaccacatcata
gctacagaatatttaaattatgaggatggaaaattctccaagagtcgaggagttggtgta
tttggagatatggcaaaggacactggtatccctgcggatatatggagattctacttactt
tatgtcagaccggagggacaagacagtgctttcagctggagtgatctcatgctcaaaaac
aactctgagctgcttaacaaccttggcaattttgtcaaccgggctggtatgtttgtgcaa
aagtttttcaatggctgtgttcctgaaatggagctgctttcagaagataagaggcttctg
gcccaagtagcagcagaactgcagcagtataaccagcatctggagaaagttcgcatccga
gatgctcttcggtgtattctgaacatttcacgtcatggaaatcagtacattcaggttaac
gaaccatggaaatgcatcaaaggaaaccaacaagagcagaagagagcaggtacagtgact
ggagtggctgtaaacatggcagctcttctctcagttatgttgcatccatacatgccaacg
gtcagcggtcttatccaggagcagctgctaatgcctcaagaatctaaagtgttaactact
gacttctgctgccgtctgcaaagtgggcaccaaattggaaatgtgagtccactgttccag
aagttggagaatgaccagatagaatccttgcgcaaacgttttggaggagggcaggtgaaa
actgagtcaaaagcacctccatgccaggaggctcccctgaaggaagcacccaaagcctct
ggcccagaaagagtaaaggagctgatgcaggaggtggaaaaacagggtaaccttgtgcgg
gagctaaaaggcaagaaagcagaaaagtccaccattgataccgaggtgcaaaagcttctg
gcgctaaagaaagagctagcgctcgcagaagggaaatcaccggatcctcccgcgcagaag
ggcaagaaaaagaaatag
DBGET
integrated database retrieval system
