Xenopus tropicalis (tropical clawed frog): 549879
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Entry
549879 CDS
T01011
Name
(RefSeq) phosphatidylinositol N-acetylglucosaminyltransferase subunit C
KO
K03859
phosphatidylinositol N-acetylglucosaminyltransferase subunit C
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
xtr01100
Metabolic pathways
Module
xtr_M00065
GPI-anchor biosynthesis, core oligosaccharide
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
549879
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Gene cluster
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Motif
Pfam:
GPI2
TMEM190
Motif
Other DBs
NCBI-GeneID:
549879
NCBI-ProteinID:
NP_001017125
Xenbase:
XB-GENE-951705
UniProt:
A4IID8
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Position
4:107291877..107310765
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AA seq
322 aa
AA seq
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MSPVLQSPVLQSPGADHYSSLSWGAGNPPSGSVGSPPIWKKVLYEHQPFPDNYVDDRFLE
ELRKNIYVRRYHYWAVVFEAGVVIQQLCSVCVFSVIWWYMDQDLLSPQKLCGVGLALTLL
GYLLFDAVDQGEGRRDSGRTHWADLKSALVFVAFTYGFSPVLKTLTESISTDTIYAMSVL
MLLGHLVFFDYGANAAVVSSTLSINMAIFASVCLASRLPRSLHAFAMVTFAIQIFALWPS
LQRKLRANTPWTYISVTFFFAIFAMAGLLSISSVGALLFFLLLLSVAFLCPYCLIRLQLF
KDNIHGPWDEAEIKEDLSRFLD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcccagtgctgcaaagcccggtactgcagagccctggtgcagaccattactccagt
ctgtcatggggagctggaaatcctccttcaggttcagttggctccccacctatctggaaa
aaggtgttatatgagcatcagccttttcctgataattatgtggatgaccgcttcctggaa
gaactgaggaagaatatttatgtacgtcggtatcactactgggcagtggtgtttgaagct
ggagtagtaatccagcagctctgcagtgtttgtgtcttctctgtaatatggtggtacatg
gaccaggatttgctgtctccgcagaagctgtgtggagttggcttggctctcacactcctt
ggctacttattatttgatgctgtagaccaaggtgaaggaagaagagacagtggaagaact
cactgggctgatctgaagagtgcacttgtatttgtagcatttacttatgggttttctcca
gtgcttaagacactgacagaatctattagcactgatacaatttatgccatgtcagtcctt
atgcttcttggacacctggttttctttgactatggagccaatgcagctgtagtttctagt
actctttccataaacatggccatttttgcttctgtttgccttgcctcacgacttccaagg
tcccttcatgcttttgctatggtcacctttgccatccagatttttgctttatggccgagc
ttgcaaagaaaacttagggctaacactccatggacatacataagtgtaacctttttcttt
gccatttttgccatggcaggactgctaagcatttcaagcgtgggtgctctgctgtttttt
cttctcctcctctctgtggcatttttgtgtccatactgtctaattcggctgcagcttttt
aaagacaatattcatggcccgtgggatgaagcagaaattaaagaagatctttctcgcttc
cttgattag
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