Xenopus tropicalis (tropical clawed frog): 549899
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Entry
549899 CDS
T01011
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
549899 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
549899 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
549899 (snw1)
Spliceosome [BR:
xtr03041
]
Complex B
Other components
Prp19-related factors
549899 (snw1)
Complex C
549899 (snw1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
549899
NCBI-ProteinID:
NP_001017145
Xenbase:
XB-GENE-1006928
UniProt:
Q28H99
A0A8J0PJ81
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All DBs
Position
8:complement(82997970..83009956)
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AA seq
535 aa
AA seq
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MALASFLPAPTQLSQDQLEAEEKLRAQKSRQTALVASRRESPPYGHRKGWVPRSLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIFSKYTDLV
PKEVMDEDDPELQRPDEETIKELTEKTRQALEKSVSQKIAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKKEEKLRELAQIARERRAGIKSHTDKEDGEAREREEIRHERR
KERQHERNLSRAAPDKRSKLQRNEERDISEQIALGIPNQRTSSEVQYDQRLFNQSRGMDS
GFAGGEDEVYNVYDKPWLGNKKLAQNIYRPSKNTDNDVYGDDLDTLVKTNRFVPDKDFSG
ADRRQRHEGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSGRAKDHDHDMKKRRKE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccagttttttgcctgctccaacgcagttatcacaggaccaattagaggca
gaagaaaagctgagagcgcagaagtctcgtcagaccgcgttagttgcatcgcgccgtgaa
tcacctccctatggccacagaaaaggatgggtacccagatcccttgaggattttggagat
ggcggtgcttttccagagatacatgtggcacaatatccactggacatgggccgcaaaaag
aaaatgtccaatgccttggctgtgcaggtcgatgcagaaggcaagataaaatatgatgct
attgctcgtcagggacagtccaaggataaggtcattttcagcaagtacacagacctggta
cctaaagaggtgatggatgaagatgatcctgagctacaaagacctgatgaggaaacaatt
aaagagctcacagagaagacaagacaggctctggaaaaatcagtgtcccaaaagattgct
gctgcaatgcctgtacgagctgcagataaattggcacctgcacagtatattaggtacaca
ccctctcagcagggagtggcttttaactctggtgccaagcagagggtgattcggatggtg
gagatgcaaaaggatccaatggagccacctcgatttaaaattaataagaaaattccacgt
gggcctccatctcctccagcaccagtaatgcattctcccagcagaaagatgactgtaaag
gaacagcaagagtggaaaatacccccatgtatttctaactggaagaatgccaagggttat
accatcccactagataaacgtttggctgctgatggccgggggctgcagactgtccatatc
aatgagaactttgctaagcttgctgaagccttgtacatagctgacagaaaggcccgagaa
gcagtggaaatgagagcccaggtggagcgtaagatggcgcagaaggagaaagagaaaaag
gaggaaaaacttagggaactggcacagatcgcaagggaacgcagagctgggataaagtcc
catacagacaaagaggatggagaagccagagagagggaagaaatacggcatgagaggcgc
aaggaacggcaacatgagcgaaacctatctagggcagccccagacaaaaggtccaaactt
caaaggaatgaagaaagagacattagtgaacagattgctcttggaattccaaatcaaagg
acatcaagtgaagttcagtatgaccagcgacttttcaaccaaagcaggggtatggacagt
ggctttgcaggtggagaggatgaggtatataacgtgtatgacaagccatggttgggcaac
aagaaactggctcagaacatctaccgtcctagtaaaaatacagataatgatgtatatggt
gatgacctggacaccttggttaaaaccaacaggtttgttcctgataaggacttttctggc
gcagatcgcaggcagcgccatgaaggtccagtacaatttgaggaggatccttttggtttg
gacaagttcttggaggaggctaaacagcatggagggtcaaaacgaccctccgatagtggt
cgagctaaagatcatgaccatgacatgaagaagcgcaggaaggagtga
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