Xenopus tropicalis (tropical clawed frog): 549973
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Entry
549973 CDS
T01011
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
xtr03420
Nucleotide excision repair
xtr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
549973 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
549973 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xtr01001
]
549973 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
549973 (cdk7)
03019 Messenger RNA biogenesis [BR:
xtr03019
]
549973 (cdk7)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
549973 (cdk7)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
549973 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
549973 (cdk7)
Protein kinases [BR:
xtr01001
]
Serine/threonine kinases: CMGC group
CDK family
549973 (cdk7)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
549973 (cdk7)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
549973 (cdk7)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
549973 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Seadorna_VP7
Haspin_kinase
FTA2
APH
Motif
Other DBs
NCBI-GeneID:
549973
NCBI-ProteinID:
NP_001017219
Xenbase:
XB-GENE-485507
UniProt:
Q28II8
LinkDB
All DBs
Position
1:complement(186221595..186236300)
Genome browser
AA seq
352 aa
AA seq
DB search
MEGIMARGVDVRSRSKQYEKLEFLGEGQFATVYKARDKNTDRIVAIKKIKLGHRAEAKDG
INRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPAHI
KSYMLMTLQGLEYLHHLWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRIYTHQVV
TRWYRSPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE
EQWPGMSSLPDYVAFKSFPGTPLHHIFIAAGDDLLELLQGLFTFNPCARCTASQALRKRY
FSNRPAPTPGSLLPRPNCSVEALKEQQNLNLGIKRKRTEGMDQKDIAKKLNF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaggggataatggcgagaggggtggatgtgcgctcccgttccaagcagtatgagaag
ctggagttcctgggggaaggccagtttgccacagtttataaagcaagagacaagaataca
gatagaattgtggccattaaaaagattaaactgggacatagagcagaggctaaagatggt
ataaacagaacagcactcagagagataaagctgctgcaggagttaagccatcctaatatc
attggccttctggatgcttttggacacaaatcaaacataagcctggtgtttgattttatg
gagacagatcttgaggttataataaaagataccagcttggtattaactccagctcatatt
aaatcatacatgctgatgactctgcagggcttggaatacttacaccacctctggatcctg
cacagagacttgaagccaaataatttgctgctggatgaaaatggggtccttaaacttgct
gattttggtcttgcaaagtcatttgggagtccaaacagaatatatactcatcaagtagta
acaaggtggtaccgatctcctgagttgctgtttggtgctagaatgtacggtgtgggagta
gacatgtgggcagttggctgcatcttagcagagctgctacttcgggtgccctttttgcct
ggggactctgatctagaccaacttacaagaatatttgaaactttgggaacaccaacagaa
gagcaatggccgggcatgtccagccttccagactacgttgcctttaaaagttttccaggg
acaccgctccaccatatttttattgcagctggtgatgatcttcttgaacttttgcaaggc
ttatttacctttaatccatgtgcacgatgcacagcatcccaggcactcagaaaaaggtat
tttagcaacagaccggcgccaaccccaggaagccttttgccaagaccaaattgttctgta
gaagcgttaaaggagcagcaaaatctcaatctaggcataaagagaaagcggacagaaggc
atggatcaaaaagacattgctaagaagttgaatttttga
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integrated database retrieval system
