Xenopus tropicalis (tropical clawed frog): 549980
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Entry
549980 CDS
T01011
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
549980 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
549980 (vps35)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
549980 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
Motif
Other DBs
NCBI-GeneID:
549980
NCBI-ProteinID:
NP_001017226
Xenbase:
XB-GENE-941152
UniProt:
A0A8J0PJQ7
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Position
4:complement(73030574..73076863)
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AA seq
509 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFSQSRKDILKDMVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTNEEVTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDKEKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNALEYNTEIGSQEQVDAIMNLVSTLIQDQPDQPAEEPD
PEDFADEQGLVGRFIHLLRSDDPDQQYLV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgacccagcagtccccccaggatgagcaggagaagctcctggatgaagcagtt
caggctgtaaaggttcagtctttccagatgaaaagatgcctggataaaaacaagctgatg
gatgctcttaaacatgcctctaacatgctgggtgagctacggacatcaatgttgtctcca
aagagctattacgagttgtacatggctatatcggacgaactgcactatttagaggtgtat
ctcacagatgagtttgcaaaaggaagaaaagtagctgatctctatgagcttgtacaatat
gctgggaatattatccccaggctttacctgctgatcactgttggagtggtatatgtcaag
tctttttcccagtcgaggaaggacattctgaaagatatggtagagatgtgtcgtggtgtc
caacatcctttaagggggctctttctccggaattaccttttgcagtgcaccaggaatatt
ttgccagatgagggggagcagacaaatgaggaagtgacaggagacataagtgactcaatg
gattttgtgttactgaactttgcggaaatgaacaagctgtgggtgcgaatgcagcaccag
ggtcacagtcgagacaaagagaaaagggagcgcgagagacaggagcttcgaatcttggtg
ggaacaaacttagtcagactaagccaactggaaggtgtcaacgtggagagatacaaacag
attgtgttgcctggaatattagaacaagttgtaaactgcagagatgctctcgcgcaagaa
tacctcatggagtgcataattcaggtttttccagatgaatttcaccttcagaccctaaac
cctttccttagagcttgtgctgagctccaccaaaatgtgaatgtgaagaatatcattatt
gctttaattgacaggctagctctgtttgcacatcgggaagatgggcctggaataccagca
gatatcaagctgtttgatattttctctcagcaggtggccacagtaatacagtcccggcag
gacatgccttcagaagatgtggtttccttacaagtgtccctcattaatcttgccatgaaa
tgctatccagaccgagttgattatgtcgataaggtccttgaaacaactgtggaaatcttt
aacaaactcaacctcgagcacattgccacaagcagcgctgtttccaaggaacttaccaga
cttttaaaaatacctgttgatacctacaacaatatcctgactgtgttgaagctgaagcat
ttccatcctctctttgaatattttgactatgagtctagaaagagcatgagttgctatgtt
cttagcaatgcactggaatacaatacagagattggctcccaagagcaggtggatgctatc
atgaacttggtttcaacgcttatacaggatcagcctgatcagcctgcagaagaaccagat
ccagaggactttgcagatgaacagggtcttgtaggcagatttattcacctgttacgatca
gatgatcctgaccaacagtacttggtatga
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