Xenopus tropicalis (tropical clawed frog): 549986
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Entry
549986 CDS
T01011
Symbol
gtf2i
Name
(RefSeq) general transcription factor II-I isoform X1
KO
K03121
transcription initiation factor TFII-I
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
549986 (gtf2i)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
549986 (gtf2i)
03036 Chromosome and associated proteins [BR:
xtr03036
]
549986 (gtf2i)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
549986 (gtf2i)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
549986 (gtf2i)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTF2I
Motif
Other DBs
NCBI-GeneID:
549986
NCBI-ProteinID:
XP_031752835
Xenbase:
XB-GENE-1217437
UniProt:
A0A7D9NJZ2
LinkDB
All DBs
Position
2:complement(100520189..100580434)
Genome browser
AA seq
948 aa
AA seq
DB search
MARFQMPDLPVLNESSDHREAIKHFITAVESMCTEFAKIKAEVACIAVYDHETLIAGSEK
GRSFLDARKDFQKAFIQYCKLEEENTPQHHVIISSKAATDCAEIESLQKSVEDLFCICYG
KALGKSTPVPVPYDKMVRDPTAVSVTGLPKDVFVKDPSNYDLETVTQILHNRSQVSFSIK
RPFLDRRKSDEDAVTDYNDASVSESYNTVQVKTEPSEDSESSLELTTVTIKEEIDDQDYY
QFNFQGCGYGEESNEATEVEQREDSALQVPSETSEDPEVEVTIEDDEYIPPNKKPKSTEI
VNEPLQFKRKTREFNFEKWNARITELRKQVEELFEKKYAQAINVTGPVAIPYHLFQSNTE
DLYVEGLPEGIPFRRPSTYGIPRLERILLARERIRFVIKKHDLLNARDVMPLEKPNTGVK
EEWYARITKLRKIVDQLFSKKFAEALGKTEAMSVPYQKFEANPAEMYVEGLPDNIPFRSP
SWYGIPRLEKIIQVGNRIKFVIKKPELLTQSVAESMQNRTNSGVKEDWNVRITKLRKQVE
EIFNTKFAQALGLPEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGS
AKIKFIVKKPQLVATHIPSELVNKINIDVSQSTESGSNPASKPPEAAVDVDTSKSCIRTT
PAQTNGSSMPFKPRGREFSFEAWNAKITDLKQKVEALFDEKCGEALGLNEPYKVPFALFE
SYPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNRAKIKFVIKKPEMIENTAKEQPPNFA
PKKAGIQNNAHTASGLEDLNIIQVTIPDADNEKNVKVDKARQLREQVNELFSKKFGEAIG
MNFPVKVPYRKITTNPGCVVVDGMPPGVSFKAPSYLEMSSMRRILDSAEFIKFTVIRPFP
GLVLNNQESESGQSAENADRSQTDEAAEEGSKDTQDLSLIKQEPDPTW
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtttccagatgcctgacttaccagtcctaaatgagtcttctgaccacagagaa
gctatcaagcactttattactgcagtggagtcaatgtgtacagagtttgccaaaatcaag
gcagaagtagcatgtatcgctgtgtacgatcatgaaacgctaatagctggcagtgaaaaa
ggaagatcctttttagatgcaagaaaggatttccagaaagcctttattcagtactgcaag
ttggaggaagagaacaccccacaacatcatgtcattataagttctaaggcagcaacagac
tgtgcagaaatagaatctctccaaaagtctgtggaggacttgttttgtatttgctatggc
aaagctttaggaaaatcaaccccagtgcctgtgccatatgacaagatggtaagagaccca
actgcagtctcagtaactggacttcccaaggatgtatttgttaaagatccatctaactat
gaccttgagactgtaacccagatattacacaacagatcgcaagtgtcattctctattaaa
agaccttttcttgataggaggaaatcggatgaggatgcggttacagattataatgatgcc
tctgtctctgagagctacaatactgtgcaagtgaaaactgagcccagtgaagattctgaa
agttcacttgagttgaccactgtcactataaaggaagaaattgacgatcaagactactat
cagtttaatttccaaggttgtggatatggtgaagagtccaatgaagcaactgaagtggag
caaagagaagattcagctctgcaagtaccttctgaaacaagtgaggacccagaagttgag
gtcactatagaagatgatgagtacattccacctaataagaagccaaagagcacagaaatt
gtcaatgaaccacttcaatttaaacgaaaaacccgggagtttaactttgaaaagtggaat
gctagaattacagagttaagaaagcaagtggaagaattatttgagaaaaaatatgctcaa
gctattaatgtgactggtcctgtcgcaatcccatatcacctttttcagtccaatactgaa
gatctgtatgttgaaggtttaccagaaggaattccattcagaaggccttcaacctatgga
attccacgcctcgaaaggatattgctagcaagggaaaggatacgatttgtcattaaaaag
catgatttgctaaatgcaagagatgttatgccgcttgaaaagcccaacacaggagtgaaa
gaagaatggtatgctagaataacgaaattaagaaaaatcgttgatcagttgttcagtaaa
aaatttgctgaggccttaggcaaaacagaggctatgtctgtgccataccagaaatttgaa
gcaaaccctgctgaaatgtatgtggaagggttgcctgataatattccattccgtagccct
tcctggtatggaattccaagactggaaaagataattcaggttggcaacaggatcaaattt
gtgattaaaaaaccagaattgctgactcagtctgtagctgaatcaatgcaaaacagaaca
aattcaggagtgaaagaagactggaatgtgaggattactaaattaagaaagcaggtagag
gagatcttcaatacaaaatttgcacaagcactgggacttcctgaagcagtaaaagtccct
tatccagtatttgagtctaacccagagttcctgtatgtcgaaggattgcctgaaggaatt
cccttccggagccccacatggtttgggatacctcggctagagagaattgttcgaggaagt
gcgaaaattaaatttatagttaagaaacctcagctggttgcaacacacattccttctgaa
ttggtcaacaaaataaatattgatgtgtcacaatctacagagagcggaagcaatccagca
agtaagccacccgaggcagcagttgatgttgatacctcaaaatcatgcatacggacgact
cctgcccagactaatggttccagtatgcctttcaaaccccggggaagagaattttctttt
gaggcgtggaatgccaaaattacagacttgaaacaaaaagtagaagccctgtttgatgag
aaatgtggggaggcacttggtcttaatgaaccctataaggttccttttgcattgtttgaa
tcatacccagaagatttctacgtggaagggcttcctgagggtgttcccttccgccggccg
tccacatttggtatccctagacttgagaagattctcagaaacagggcaaaaattaaattt
gttattaaaaaacctgaaatgattgaaaacactgccaaagaacagcctccaaactttgca
ccaaaaaaggcaggaattcagaacaatgcacatacagcttctggacttgaagatctgaat
ataatccaagtgacaataccagatgcagacaatgaaaaaaacgttaaagtagacaaagcc
cgacagctgagggagcaagtcaatgaactgttcagtaagaagttcggagaagccattggc
atgaactttccagtaaaagtcccttacaggaaaattacaactaacccaggatgtgtggta
gttgatggaatgcctcctggagtttcattcaaagcccccagttaccttgaaatgagttct
atgcgtaggattctggattcagctgaatttattaagtttacagttataaggccttttcca
gggctggttcttaacaaccaagaaagtgaatccggacagtcagcagaaaatgctgacaga
agtcaaacagatgaagctgcagaagaaggatcaaaagacacacaagacttaagtcttata
aaacaagaaccagatcccacgtggtaa
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