Xenopus tropicalis (tropical clawed frog): 550016
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Entry
550016 CDS
T01011
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
550016 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
550016 (nudt21)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
550016 (nudt21)
SSDB
Ortholog
Paralog
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Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
550016
NCBI-ProteinID:
NP_001017262
Xenbase:
XB-GENE-921415
UniProt:
Q28J89
A0A8J0PJC9
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All DBs
Position
4:complement(51659037..51670081)
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AA seq
227 aa
AA seq
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MSVLPPNRSQTGWPRGVNQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVQQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgttgcctccaaaccgttcccagaccgggtggccccgcggggtgaatcagttc
ggtaacaaatacatccaacaaaccaagcctctcaccctggagagaaccatcaacctgtat
ccccttacaaattacacttttggcaccaaagagcctttgtatgaaaaggacagttcagtg
gctgcaaggttccagcgcatgcgcgaggagtttgataagatcgggatgcgacgcactgta
gaaggggttcttattgtacatgaacacagattgcctcatgtgctcttactgcaactgggc
accaccttcttcaaactgcctggaggagaactcaatccaggagaggatgaggtggaaggt
ttgaaacgtttaatgacagaaatacttggccgtcaagatggagttcagcaggactgggtt
attgatgactgtattggaaattggtggaggcccaactttgaacctcctcagtatccatac
attcctgctcatattacaaaacctaaagaacacaagaaattgttcctagttcagttgcag
gagaaagcactatttgctgtgcccaaaaattacaaacttgttgcagcccctttatttgaa
ttgtacgacaatgctcctggatatggccccatcatttcaagtctcccacagcttcttagc
aggtttaattttatttacaactga
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