Xenopus tropicalis (tropical clawed frog): 550050
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Entry
550050 CDS
T01011
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
550050 (rffl)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
550050 (rffl)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
550050 (rffl)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
Prok-RING_4
zf-RING_5
zf-RING_2
MUG2_C
Motif
Other DBs
NCBI-GeneID:
550050
NCBI-ProteinID:
NP_001017296
Xenbase:
XB-GENE-5739974
UniProt:
Q5BL61
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Position
2:96523269..96550124
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AA seq
329 aa
AA seq
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MWAACCNWLCFDTEPHEISQSDRTQAFSNSNFRTSPPVSEISCKACGIRFAACARKNPCM
DCKNYYCAACLIQTNNGHSLCQVCRSIRSTAFDRDELMKLRVKDLRDYLTLKDIPIDLCR
EKEDLVQLILFHKPPVFSADGTNVPTASSNQSTTNQRTDSSYTPGHPPYNTSAANRTGSS
NAQGTAGEHLVDSESSDPEENLAPGRRASLSDLTCVDDIEALSVRQLKEILARNFVDYKG
CCEKWELMERVTRLYNEQKGLKEMAAAEAEGINGTTSEENICKVCMDSPIDCVLLECGHM
VTCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgcctgctgtaactggctgtgttttgatacagaaccacatgaaatttcacag
agtgacagaacacaagctttttccaattcaaacttcaggacctctcctcctgtttcagaa
atctcctgcaaagcttgtggtatccgttttgcggcatgtgctagaaagaacccctgcatg
gattgcaagaattactactgtgcagcatgtctaatccagacaaacaatggccattccctt
tgtcaagtatgcagaagcatccgctccacagcctttgaccgagatgagttgatgaagcta
agagtaaaagacttgcgggattacctaactttaaaagacattcccatagacctttgtcga
gaaaaggaagatcttgtacagcttattttgtttcataaacccccagtttttagtgccgat
ggaaccaatgtgcctactgctagttctaaccaaagcaccacaaatcaaagaacagattcc
agctacacacccgggcaccccccttacaatacttcagcagcaaacagaactggttcatcc
aatgcccagggcacagctggagaacatttggtggattctgaatcatctgacccagaggag
aatctggcacctgggaggagggcatccctctctgatctcacctgtgtggatgacattgaa
gccctttccgtgcgtcagctaaaagagatcttggccagaaattttgttgactataaaggc
tgctgtgagaagtgggaactcatggaacgtgttacccggttatacaatgaacaaaagggt
cttaaggagatggctgctgctgaagcagaaggcattaatggtacaacaagcgaagagaat
atctgcaaggtctgcatggactcccctatcgactgtgttctcttagagtgtggccatatg
gtgacttgcaccaaatgtggcaagcgcatgagtgaatgccctatctgtcgacagtatgta
gtgagagcagtgcatgtattccgttcctga
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