KEGG   Xenopus tropicalis (tropical clawed frog): 550050
Entry
550050            CDS       T01011                                 
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
  KO
K20804  E3 ubiquitin-protein ligase RNF34 [EC:2.3.2.31]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    550050 (rffl)
Enzymes [BR:xtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     550050 (rffl)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    550050 (rffl)
SSDB
Motif
Pfam: RNF34L-like_3rd SAP_RNF34_RFFL zf-C3HC4_3 FYVE_CARP1-2 ARMET_C Prok-RING_4 zf-RING_5 zf-RING_2 MUG2_C
Other DBs
NCBI-GeneID: 550050
NCBI-ProteinID: NP_001017296
Xenbase: XB-GENE-5739974
UniProt: Q5BL61
LinkDB
Position
2:96523269..96550124
AA seq 329 aa
MWAACCNWLCFDTEPHEISQSDRTQAFSNSNFRTSPPVSEISCKACGIRFAACARKNPCM
DCKNYYCAACLIQTNNGHSLCQVCRSIRSTAFDRDELMKLRVKDLRDYLTLKDIPIDLCR
EKEDLVQLILFHKPPVFSADGTNVPTASSNQSTTNQRTDSSYTPGHPPYNTSAANRTGSS
NAQGTAGEHLVDSESSDPEENLAPGRRASLSDLTCVDDIEALSVRQLKEILARNFVDYKG
CCEKWELMERVTRLYNEQKGLKEMAAAEAEGINGTTSEENICKVCMDSPIDCVLLECGHM
VTCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq 990 nt   +upstreamnt  +downstreamnt
atgtgggctgcctgctgtaactggctgtgttttgatacagaaccacatgaaatttcacag
agtgacagaacacaagctttttccaattcaaacttcaggacctctcctcctgtttcagaa
atctcctgcaaagcttgtggtatccgttttgcggcatgtgctagaaagaacccctgcatg
gattgcaagaattactactgtgcagcatgtctaatccagacaaacaatggccattccctt
tgtcaagtatgcagaagcatccgctccacagcctttgaccgagatgagttgatgaagcta
agagtaaaagacttgcgggattacctaactttaaaagacattcccatagacctttgtcga
gaaaaggaagatcttgtacagcttattttgtttcataaacccccagtttttagtgccgat
ggaaccaatgtgcctactgctagttctaaccaaagcaccacaaatcaaagaacagattcc
agctacacacccgggcaccccccttacaatacttcagcagcaaacagaactggttcatcc
aatgcccagggcacagctggagaacatttggtggattctgaatcatctgacccagaggag
aatctggcacctgggaggagggcatccctctctgatctcacctgtgtggatgacattgaa
gccctttccgtgcgtcagctaaaagagatcttggccagaaattttgttgactataaaggc
tgctgtgagaagtgggaactcatggaacgtgttacccggttatacaatgaacaaaagggt
cttaaggagatggctgctgctgaagcagaaggcattaatggtacaacaagcgaagagaat
atctgcaaggtctgcatggactcccctatcgactgtgttctcttagagtgtggccatatg
gtgacttgcaccaaatgtggcaagcgcatgagtgaatgccctatctgtcgacagtatgta
gtgagagcagtgcatgtattccgttcctga

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