Xenopus tropicalis (tropical clawed frog): 550052
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Entry
550052 CDS
T01011
Symbol
gtf2h5
Name
(RefSeq) general transcription factor IIH subunit 5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
xtr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
550052 (gtf2h5)
09124 Replication and repair
03420 Nucleotide excision repair
550052 (gtf2h5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
550052 (gtf2h5)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
550052 (gtf2h5)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
550052 (gtf2h5)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
550052 (gtf2h5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
550052
NCBI-ProteinID:
NP_001017298
Xenbase:
XB-GENE-1014331
UniProt:
A0A803JS69
LinkDB
All DBs
Position
5:52598923..52610719
Genome browser
AA seq
71 aa
AA seq
DB search
MVNVLKGVLVECDPAMKQFLLYLDETNALGKKFIIQDLDDTHVFILAEVVAILQEKVGEL
MDQNSFPVTQK
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgtccttaaaggagtccttgtggaatgtgatccggcaatgaagcaatttctc
ctatacttggatgagaccaatgccttaggaaagaagttcattatccaagacctggatgac
acccatgtttttatcttggctgaagtagttgctatactgcaggagaaagttggagagctg
atggaccagaactcttttccagtcacacagaaataa
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integrated database retrieval system
