Xenopus tropicalis (tropical clawed frog): 550063
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Entry
550063 CDS
T01011
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
550063 (tbpl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
550063 (tbpl2)
03021 Transcription machinery [BR:
xtr03021
]
550063 (tbpl2)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
550063 (tbpl2)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
550063 (tbpl2)
RNA polymerase III system
TFIIIB
550063 (tbpl2)
RNA polymerase I system
SL1/TIF-1B
550063 (tbpl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
550063
NCBI-ProteinID:
NP_001017309
Xenbase:
XB-GENE-876138
UniProt:
Q28DH2
LinkDB
All DBs
Position
8:104568226..104585397
Genome browser
AA seq
322 aa
AA seq
DB search
MDGESSLERYLDQCDAEDVLASSAHMYTPMTPYDDLAIQPLPGTSYSSALEQSKELSTDF
SSVDLSFLPDDLNQENEDQQEQQTSSQSLEQDSGICLDASNLSQPFTPSECRDASQDSTN
LCPMPITPMTPMTPMTPVAESSGIVPQLQNIVSTVNLACKLDLKKIALHARNAEYNPKRF
AAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQN
MVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKE
RSEIYEAFENIYPILKGFKKTT
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatggagagtcttctttggagagatacttagaccagtgtgatgctgaggatgttttg
gcttcctctgctcacatgtacacaccaatgactccatatgatgatctagcaatacaacca
cttccaggaacatcatattcttctgcacttgaacagtccaaggagctgtcaactgatttt
tcttctgtggatcttagttttcttcctgatgacctgaatcaagaaaatgaggatcaacaa
gaacaacaaacttcatcacaatcactagagcaagatagtggtatttgcttggatgcctct
aatctttctcagccatttacaccttctgaatgcagagatgcttcccaagattcgactaac
ctatgtcccatgcccattaccccaatgactccaatgactccgatgaccccagttgcagag
agttctgggatagttcctcagttgcagaatatagtgtccactgtgaatttagcctgtaaa
ctggacctaaagaagattgcgcttcatgccagaaatgcagaatataatccgaagagattt
gctgcagtaattatgcggatcagagaacccaggacaacagcactcatattcagctctggc
aaaatggtctgcactggtgcaaaaagtgaagagcagtccagactggcagcaaggaagtat
gcacgagtggtacagaagcttggattcccagcaaagttccttgactttaagatacagaac
atggtgggaagttgtgatgtgagatttccaatccgtttagaaggtttggtattgactcat
cagcagtttagcagctatgaacctgaattgtttccgggcctcatctataggatggtgaag
ccaagaattgttctgcttatttttgtttctggaaaagttgtgttgactggtgccaaagag
cgttctgaaatttatgaagcatttgaaaatatataccctattcttaaaggttttaagaaa
acaacctaa
DBGET
integrated database retrieval system
