Xenopus tropicalis (tropical clawed frog): 550072
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Entry
550072 CDS
T01011
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
550072 (traip)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
550072 (traip)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
550072 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-C3HC4_4
zf-RING_Vps41
Zn_ribbon_8
RING_XB3-XBAT31
MAD
zf_RING_Vps8
RINGv
zf-RING_16
zf_RING_Vps8_fungal
zf-RING-like
zf-Nse
WEMBL
FANCL_C
GAS
Crescentin
Motif
Other DBs
NCBI-GeneID:
550072
NCBI-ProteinID:
NP_001017318
Xenbase:
XB-GENE-922321
UniProt:
F7EDI4
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All DBs
Position
4:complement(126169891..126182060)
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AA seq
463 aa
AA seq
DB search
MPIRAYCTICSDFFDNSRDVAAVTCGHTFHQECLLQWFHSAPHRTCPQCRIQVSSRQIIN
KLFFDIGGEEETVLDPESLKNEVDRIKVSLLAKEKEKRECQGLVDSLREMLDVRNVTIQS
LQKELGDMEMLCSTLKKQMKFLDNQKSETKAAKDEARKLRNKLKTMESIEVLLQAQRPEV
EEMIRNMGSGQAAVEQLAIYCVSLKKEYENLKEVRKSSAEMTEKLRKEIFASNNKAQKAE
LQLTKVREELSASQKELHNADKEIMSLKKKVEFLQKTLTTPTASNEAISRLIFESPAPIG
LERPKLRPPIMGNDINLDVTFDIDTPEHSTQKAVVAPFKKMKFDSKESPMSSPTKTPLQE
SKGLMSWAGGKAGADEDDLTLPSFIKNSLIHKKPVGSLLSLRQNTGAVRTGFDGLGGRTK
FIQPSNLTEIRPLHQKMKRKKVSRPTACTSSLANQPRLEDFLK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcccatacgtgcctactgtacaatttgctcggatttctttgataattcgcgggatgtg
gccgcggttacgtgtgggcacacgttccatcaggagtgcttgctccagtggtttcactcg
gctccacatcgtacctgtccacagtgtcgaatccaggttagctccaggcaaattatcaac
aagctcttctttgatattggtggagaggaggagactgtacttgatccagaatcattgaag
aatgaagtcgacagaataaaagtcagtctgcttgcaaaagagaaagagaagagagaatgt
cagggtcttgtggactctttacgggagatgctagatgtcagaaatgtcactatacaatcc
ctgcagaaggagttgggggatatggaaatgctctgttcaacactaaagaaacaaatgaag
ttcttggataatcagaagtcagagaccaaagctgccaaggatgaagctcggaagctaaga
aacaagctgaagaccatggaaagcattgaagtgttgttacaggcccagagaccagaagtg
gaggagatgatcagaaatatgggatcaggacaggctgcggtggaacaactcgctatatac
tgtgtatcattaaaaaaagaatatgagaatttaaaagaagtccgaaaatcttctgctgag
atgactgagaagctaagaaaggaaatatttgcgtcaaacaacaaggcacaaaaggctgag
ctgcagttaactaaagtacgggaagagctcagtgccagtcaaaaggagcttcacaatgca
gataaggaaatcatgagcttaaagaaaaaggttgagtttctgcagaagacacttaccaca
ccaacagcatccaatgaagcaattagtcgtttgatctttgagagtcctgcacccatcggg
ttggaaagaccaaagctccggccaccaataatggggaatgatattaaccttgatgtcact
tttgacattgatacacccgaacacagcacacaaaaagctgttgtcgctccgttcaagaaa
atgaagtttgatagtaaagagagtcccatgtccagcccaacgaaaacccctctgcaggag
agcaaaggtttaatgagctgggcaggaggtaaagccggagctgatgaagatgaccttacc
ttgccatcgttcattaagaactcgctgattcacaagaaacctgtagggagtctacttagc
cttcggcaaaacacaggagccgtacggactggatttgacggtttgggaggaagaactaag
ttcatccagcctagtaacctaacagaaatccgacccttgcatcaaaagatgaagaggaaa
aaagtttccaggcccacagcatgtacttcctcacttgccaaccagcccaggctagaagac
ttcttgaaataa
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