Xenopus tropicalis (tropical clawed frog): 550107
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Entry
550107 CDS
T01011
Symbol
dtx3
Name
(RefSeq) protein deltex-3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
550107 (dtx3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
550107 (dtx3)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
550107 (dtx3)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
550107 (dtx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-Nse
zf-C3HC4_3
zf-RING_11
zf-RING_6
zf-RING_10
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
550107
NCBI-ProteinID:
NP_001017353
UniProt:
F7AKB7
Q07G21
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All DBs
Position
8:complement(123207855..123216167)
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AA seq
212 aa
AA seq
DB search
MPGRRSNNKKHFPTSPMGAPASCNSQEEQCPICLSGFKDKQTLEKCKHSFCGDCISRALQ
VKKACPICGCLYGELTGNQPDGKMEFVRDASLHLPGYEQYGAIIIRYTFQPGIQGPKHPN
PGVRYPGTTREAFLPDSPRGNKVLKLFEKAFNQRLTFTIGTSVTTGRSNVITWNDIHHKT
NCTGGPQMFGYPDPTYLRRVEEELEAKGLTAD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcagacggtcaaacaacaagaagcattttccaacatcaccaatgggggcccca
gccagctgcaacagccaagaagaacagtgccccatttgcctgagtgggtttaaggacaag
caaacgctggaaaagtgcaagcattccttctgtggggactgtataagcagggctctacag
gtgaagaaagcctgccccatatgtggctgtttgtatggggagctgaccggaaaccagcct
gatggcaaaatggagtttgtcagggacgcttctttgcacctgcctggctatgagcaatat
ggggccattattatccgttacacattccaaccaggcattcaagggccaaagcatcccaat
cccggagtaagatacccaggaacaactcgggaggcgtttttgcctgacagccccagggga
aacaaagtcctaaaattatttgaaaaagccttcaatcaacgtttaaccttcaccattggg
acatcagtgaccacagggcgctccaatgtcataacatggaatgatattcaccataaaact
aactgcacaggaggcccacagatgttcggatacccagacccaacctacctgcggagagtt
gaggaggagctggaagccaaaggtctgacagccgactaa
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