Xenopus tropicalis (tropical clawed frog): 594908
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Entry
594908 CDS
T01011
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
594908 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
594908 (irf6)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
594908 (irf6)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
594908 (irf6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
594908
NCBI-ProteinID:
NP_001025493
Xenbase:
XB-GENE-876410
UniProt:
Q28ET3
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Position
5:complement(88798712..88811679)
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AA seq
460 aa
AA seq
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MAMHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQQEEEKTIFKAW
AVETGKYQEGADEPDPAKWKAQLRCALNKSREFKLMYDGTKEVPMNPVKIYEVRDIPQSQ
GSIINPGSTGSVPWDDDDFEEDELNQSQNHVPIQEPFNCLNINGDSPMGSSSTGSCTPEQ
TWPKTEPQEMEVPPAAGPADFFSSPEMWINSLPMTDLDIQFFYRGKEMGQTMTVSNPQGC
RLFYGDLGPMPNQEELFGPITLEQVRFPGTEQIVNEKQKLFTSRLLDVMDRGLILEVSGH
AIYAIRLCQCKVYWNGPCSPSQTTPNLIERQKRVKLFCLETFLSDLISHQKGFITKQPPY
EIYLCFGEEWPDGKSKERKLIVVQIIPIVARMILEMFSGDNTRSFDSGSIRLQISVPDIK
DNIVSHLKQLYRFLQNHQGPDAWPLMQPQNMHLAQMLQAQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctatgcacccccgtcgtgttcggctaaaaccatggctggtggcccaggtagatagt
ggaatgtaccctggtctcatctggttgaacagagaagccaaaaggttccagatcccgtgg
aaacatgccacaaggcatagcccccagcaggaagaagagaaaacaatatttaaggcctgg
gctgttgagacaggcaaataccaagaaggagctgatgaaccagacccagccaaatggaaa
gctcagctgcgctgtgcactaaacaagagcagagagtttaaacttatgtatgatgggacc
aaagaggttcctatgaacccagttaaaatttatgaggtgcgtgacatcccccagtcccaa
ggatccatcatcaacccaggttccacaggatctgtaccatgggatgatgatgactttgaa
gaggatgagctaaatcagtctcagaaccatgtaccaatccaagagccctttaactgtcta
aatattaatggagactcacccatggggtcatctagcacaggcagctgcacccctgagcaa
acatggccaaagactgagccccaggagatggaagtgcccccagcagcaggccctgctgat
tttttcagttctccagagatgtggatcaattctctaccaatgactgacttagatatacag
tttttctaccgtgggaaagagatgggtcagacaatgacagtcagtaaccctcaaggctgc
cggcttttctatggtgacctaggaccaatgcccaatcaggaggagctgtttggaccaata
actctagaacaggttcgcttccctggaacagagcaaattgtaaatgaaaagcagaagctt
tttactagccgtctccttgatgtcatggacaggggcctgatactagaggtcagcgggcat
gccatatacgcaatcagattgtgccagtgtaaggtctactggaatggaccctgctcacca
tctcaaactaccccaaatcttattgaaaggcagaagagagtaaaactcttctgtttggag
actttcctaagtgatcttatttcacaccaaaaggggttcattacaaaacagccaccctat
gaaatctacttgtgctttggagaagaatggccagatggcaaatccaaagaaagaaagctc
atcgttgttcagataataccaattgtggcacgaatgatactagagatgtttagtggggat
aacacccgttcctttgacagtggcagcattcgtctgcagatttccgtccctgacatcaaa
gacaacattgtttctcacttaaaacaactgtatcgctttcttcagaatcatcaaggccca
gatgcatggcctctcatgcagccacaaaacatgcacctggctcagatgctccaagcccag
tga
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