Xenopus tropicalis (tropical clawed frog): 594966
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Entry
594966 CDS
T01011
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03420
Nucleotide excision repair
xtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
594966 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
594966 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xtr03051
]
594966 (rad23b)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
594966 (rad23b)
Proteasome [BR:
xtr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
594966 (rad23b)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
594966 (rad23b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Ubiquitin_5
UBA_2
Dsc3_N
DUF1421
UBA_9
Motif
Other DBs
NCBI-GeneID:
594966
NCBI-ProteinID:
NP_001025578
Xenbase:
XB-GENE-984319
UniProt:
F7A2H2
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All DBs
Position
1:120685872..120706502
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AA seq
416 aa
AA seq
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MQITLKTLQQQTFKIDIDGEETVKALKEKIELEKGKDAFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVTKPKGAACSSTPTPAASQPASAAAPAPASPPLTYTPIARQNAPIPL
PVPFSIPAVPAPAAPTSEPSTTTAPKEEKPEEKTDSPQETVSPSSTECSLPTDSSRPSLF
EDATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPSDREGQA
VAEPPQTLSSTPTQPLPAAAGAAATTTTPSTPSTGGNPLDFLQNQPQFQQMRQIIQQNPS
LLPALLQQIGRENPSLLQQISQHQEQFIQMLNDPVPESGGQGGGGGGGGGGGRGIAAEAG
SGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDD
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcactctgaagacccttcagcagcaaacatttaagatagacatcgacggagag
gagacggtcaaagcactgaaagaaaagattgaactagaaaaagggaaggatgcatttcct
gttgctggtcaaaagttaatttatgcaggtaaaattctaaatgatgacacggcccttaaa
gaatataaaattgatgagaagaactttgtggtggttatggtgacaaaaccaaaaggtgca
gcatgttcttcaactcctactcctgcagcatcccagccagccagtgctgcagctccagct
ccggcctcaccccctctaacatatacaccaattgcccgacaaaacgcccctatacccttg
cctgtacctttctccatacccgctgttcctgctcctgctgcacctacttctgagccatcc
acaaccactgcacctaaggaagagaaacctgaagaaaaaacagacagtccacaggagact
gtgagtccctcatcaactgagtgcagtttaccaactgattcctctcgaccatctctcttt
gaagatgccacaagcgcactcgttacaggtcaatcatatgaaaatatggtaactgaaatt
atgtcaatgggctatgagcgagaacaagtaattgctgcgctgagagcaagttttaacaat
ccagaccgggcagttgaataccttcttatgggaatccctagtgatcgtgaaggtcaggca
gttgcagaacctccccagactttaagcagtacacctactcagcctcttcccgctgcggca
ggtgcagctgcaacgactactacaccatctacaccctcaacgggaggaaatccccttgat
ttcttgcagaatcagcctcagtttcagcagatgaggcagatcattcagcagaatccttcc
ctattaccagcacttctccaacaaatcggtcgggagaatccctcactactgcagcaaatt
agccagcatcaagagcaatttattcagatgttaaatgacccagtcccagaaagtgggggg
caaggtggaggaggaggcggaggaggtggaggtggaagaggcattgcagcagaggctgga
agcggtcatatgaactacattcaagtcacacctcaggaaaaagaagctatagaaaggcta
aaagcactaggattccctgaaggacttgtgatacaagcttatttcgcatgcgagaagaat
gagaatttggctgccaacttccttctacagcaaaactttgatgatgattga
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