Xenopus tropicalis (tropical clawed frog): 595001
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Entry
595001 CDS
T01011
Symbol
matn1
Name
(RefSeq) cartilage matrix protein precursor
KO
K19467
matrilin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
595001 (matn1)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
595001 (matn1)
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GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
EGF_3
Copine
EGF_LRP2
Choline_kinase
HSBP1
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
595001
NCBI-ProteinID:
NP_001025613
Xenbase:
XB-GENE-957559
UniProt:
Q5BKH6
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Position
2:83123701..83133933
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AA seq
490 aa
AA seq
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MRTSLCLLTTLLLCYHHATHGVSLQAQKGPNCRTRPTDILFIIDSSRSVRPSEFEQVKVF
LSQVVESLDVGANATRVGLVNYASTVKNEFSLKTHKAKPALLQAVKKVQPLSTGTMTGLA
IQYAINIAFTEPEGARLKSPGINKVAIIVTDGRPQDAVKDISARARESGLEIYAIGVGRV
DKNTLRQIASEPLDEHVDYVESYSLIEKLSKKFQEAFCVTADLCSTGDHDCEQICVSTPG
SYTCACRDGFTLNEDGKTCNACGASAVDLVFLIDGSKSVRPENFELVKQFINQIVESMDV
GDHRAHVGLVQYSSSVRQEFPLGRYTSKKDIKSAVKKMSYMEKGTMTGQALQYLIDNSFA
ISSGGRPAVPKVGIVFTDGRSQDYINDAALRAKELGYKMFAVGVGNAVEEELRMIASEPV
VEHSFYTADFKAMKEIGKKLQMKICVEENPCECESIVKFQTKVEDLIQQLTKKIEAVSKK
LAALENKITV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaggacttctctgtgtctcctgaccactcttctcctctgctatcaccatgccactcat
ggagtttctcttcaagcgcagaaggggcccaattgtagaacccgacccaccgacatactg
ttcatcatagacagctcacgtagtgtccgcccatctgaatttgagcaagtcaaggtcttc
ctgtcccaggtcgtcgagtcactggatgttggagccaatgcgaccagagtggggttggtc
aactatgccagtaccgtcaaaaatgagttttctctcaaaacacacaaagcaaagccagcg
cttcttcaagctgtgaaaaaagttcagccactctcaactggcacaatgacaggccttgct
attcaatatgctatcaacattgccttcacagagcctgagggggcccggctaaagtcccct
ggcatcaataaggttgcgatcattgttacagatggccgaccccaggacgctgtgaaagat
atctctgcacgggcaagagaaagtggattagaaatatatgctattggagtaggacgtgtg
gataagaacaccctgcgtcagattgccagtgaacccttagatgaacatgttgactatgtg
gaaagttacagtttgattgagaagcttagcaagaaatttcaggaagcattctgtgtaacg
gctgacctatgttctactggagatcacgactgtgaacaaatctgtgtcagcaccccaggt
tcctacacttgtgcctgtagggatggtttcaccctaaatgaagatggcaagacttgcaat
gcctgcggagcttctgctgttgacttggttttccttattgatggctctaagagtgtacgt
cctgagaactttgaactcgtcaagcagttcatcaaccagattgtggagtctatggatgta
ggcgaccatagggctcatgttggcttagtgcaatattccagttcagtaaggcaagagttt
ccccttggcaggtatacttctaaaaaagacattaaatctgcagtaaagaaaatgtcctac
atggaaaagggtaccatgacaggtcaggccctgcagtatcttatcgacaacagttttgcc
atttccagtggaggtagaccagctgtacccaaagttggcattgtctttactgatgggcgg
tcccaggattacatcaatgatgctgctctcagagccaaggagctaggttacaagatgttt
gctgttggcgttggcaatgctgtggaagaagagctcagaatgattgcttctgaacctgtg
gtagagcattccttctacaccgcagattttaaagcaatgaaggagattggcaagaagctt
caaatgaaaatttgtgtggaagaaaacccatgcgagtgtgagtccatagtcaagttccag
accaaggttgaagatctcatccagcaacttacaaaaaagattgaggcagtatccaagaaa
cttgctgctttggaaaacaaaatcacagtgtga
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