Xenopus tropicalis (tropical clawed frog): 595038
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Entry
595038 CDS
T01011
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
595038 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
595038 (nup58)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
595038 (nup58)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
PSY3
Nup49_C
FapA
GAIN_ADGRA3
DUF5305
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
595038
NCBI-ProteinID:
NP_001025650
Xenbase:
XB-GENE-6257751
UniProt:
Q5BJ32
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All DBs
Position
2:complement(156308167..156346740)
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AA seq
527 aa
AA seq
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MASGFSFGGAPASTTTLNPAAGAAAPFSFGGTPAASNTGTAGGLGFGAFGATPTTQTATT
GLGGGLFGAKPATGFTLGGANTATATTTTASTGFSIGFNKPAGSATPFSLPATTASSGGL
SLSSALTSTQAAGSSPFTLNLGSTPATTTAVSTGLSLGGTLTGLGGTLGGSLGGSLFQNP
NPSVTALGQNTLGQNTLGQNTLGQNTLGQNTLGQNTLGQNTLGQNTLGQNTLGQNTLGLG
LNLGVVAPVSQVTANEGLGGLDFGSSSDKKSDKAGTRPEDSKAFKDDNLPQLLCQDVENF
QKFVKEQKQVQEEISRMSSKAMLKVQEDIKALRQLLSVASSGLQRNSLAIDKLKIETAQE
LKNAEIALRTQKTPPGLQHENTAPADYFHTLVQQFEVQLQQYRQQIEELENHLATQSNSS
HLSPQDLSLAMQKLYQTFVALAAQLQAVNENVKMLKEQYLGYRKAYLGDSADVFEARRAE
AKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPTTGLNAFKL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggattcagttttggtggcgccccggccagcaccactacactaaacccagca
gccggagccgcagcccccttttcctttggtggaaccccggcagcaagtaacactggcacc
gctgggggacttggctttggtgcatttggtgcaacccctacaactcaaacagctacaaca
ggccttgggggagggctctttggagcaaaacctgccactggatttacactgggtggagca
aatacagccactgctacaactacaacggcttccacaggatttagcattggtttcaataaa
ccagcaggatctgccacaccattttcactgccagcaaccactgcctcttctgggggcctt
tccttgtcttctgctctcacatctactcaagctgcaggctcttctccatttactttaaac
ttgggtagtacgcctgccacaactacggctgtttccactggcttgtctcttggtggaacg
ctgaccgggctcggtggaacactcggcggatcgcttggtggatcactctttcaaaaccca
aatccttcagtaacagcgctgggccagaacacgctgggccagaacacgctgggccagaac
acgctgggccaaaacacgctgggccagaacacgctgggccagaacacgctgggccagaac
acgctgggccagaacacgctgggccagaacacgctgggccagaacacgctgggccttgga
ttaaatttaggagttgtagctcctgtctcacaggttacagcaaatgaagggcttggaggt
ctagatttcggcagctcttctgacaaaaaaagtgacaaagccggaaccaggccagaggat
agcaaagcatttaaagatgacaatctacctcagttgttatgtcaagatgtagaaaatttc
cagaaatttgtgaaggagcagaaacaagtccaggaagagatcagccgaatgtcctccaaa
gcaatgctgaaagtacaggaagacattaaggcattaagacagcttttatctgttgcatcc
agcggcctccaaaggaattccttggctattgacaagctgaaaattgaaacagctcaggaa
cttaagaatgctgaaatagctttaaggacacagaaaacacctcctggacttcagcatgaa
aatactgctccagccgattattttcacacactggtgcaacagtttgaggtccagttacag
caatacagacagcaaattgaggaactggagaatcatctagcaacacagtcaaatagttca
catttgtctccccaagatttgtcattggcaatgcagaagctttaccaaacatttgtggcc
ttagctgcccagctccaggcagtaaatgaaaatgttaagatgctcaaagaacagtacctt
ggctaccggaaagcatatttgggcgactcagcagatgtctttgaggcgaggcgagcagaa
gcgaagaagtggcagagtgcaccgcgtgttaccaccggacccacccctttcagcaacata
ccaaacgccgctgccgttgccatggctgcaacattaacgcaacagcagcagcctaccaca
ggtctgaatgcattcaagttatag
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