Xenopus tropicalis (tropical clawed frog): 613049
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Entry
613049 CDS
T01011
Symbol
myb
Name
(RefSeq) transcriptional activator Myb isoform X1
KO
K09420
transcriptional activator Myb
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
613049 (myb)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
613049 (myb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cmyb_C
Myb_DNA-binding
Myb_DNA-bind_6
LMSTEN
Myb_DNA-bind_7
SANT_DAMP1_like
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
613049
NCBI-ProteinID:
XP_002935855
Xenbase:
XB-GENE-867553
UniProt:
F6UI17
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Position
5:71711458..71730007
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AA seq
742 aa
AA seq
DB search
MARRPRNSQYSSEDEDDDIEMYEHDYDGLLSKGKRHLGKTRWTREEDEKLKKLVEQNGTE
DWKVIASFLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVHKYGPKRWSVIAKH
LKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNAI
KNHWNSTMRRKVEQEGYLQESKTNQSSIATNFPKSNHLMAFSHTPASAQHSQPSASSFPY
YHIAEHQNAYPVALHVNIVNVPQPATAPVQRHYNDEDPDKEKRIKELELLLMSTENEVNQ
KQALLNHAASYPTWHSTTIGGNPRLHRQSTPNSCLGDQHHSTPSPPVDHSCLPEESAAPA
RCFGVNLLIQMKNLPEYSETQLIDSAPSSWVEHNSFEINEQDDSSPSSTPSGQTSESEDG
EGSLCSPRLVPDIDLSESMMCQGSPCSLNSAESTLSPRIILHKKRGRLSYLVSEERGLFS
LADLSSSTPKYSPIKSLPFSPSQFLNTSAQHENLEIEHSSLTSTPVCSSQKTTFSTSLLR
DHTPRLQKENHLLRTPAIKRSILDSTPRTPTPFKNALAAQEFKHGPLKLLHHTPSHLAED
IQEVIKQESDESGIVPEHCHTEEPILKRIKQEVESPTHKVGNFYFSSYWEGESLNAQLFR
QQSALDDTSNSILTSSLLMKPVCEKEDHIFKSFPVQSIKSFTNPLQHLSGTWDVMSCGKM
EEQKILAEQYCKYIKNFSTLVM
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggccaggagaccaaggaacagccagtacagctcagaagatgaagatgatgacatagaa
atgtatgaacatgattacgatggcttgttatccaaaggaaaacggcatctaggaaagacc
cgctggacccgtgaagaggatgagaaactcaagaagttagtggaacaaaatggcactgaa
gactggaaagtgatagccagcttcctgcctaaccgaacagatgtccagtgtcagcataga
tggcagaaagttttaaaccctgaacttatcaaaggtccatggacaaaagaagaggaccag
cgggtgattgaacttgttcataaatatggccccaaaagatggtctgtcattgccaagcac
ttgaagggtcgtataggcaaacaatgcagagagaggtggcataaccacctaaacccagag
gtaaagaaaacttcctggactgaggaagaggatagaatcatatatgaagcgcacaaacgt
ctggggaatagatgggcagaaattgcaaagcttcttcctggaagaactgataatgccatc
aagaaccactggaattctaccatgcgtcgcaaggttgaacaggaaggttatcttcaggaa
tccaaaaccaaccaatcctccatagccacaaacttcccaaagagcaaccatttgatggct
ttttctcacactccagcttctgctcagcactctcagccctccgcaagcagcttcccttac
tatcatatagctgagcatcaaaatgcctaccctgtagcgctgcatgtcaatattgtcaat
gtcccacagccagcaactgcaccagtacagagacactataatgatgaagatccagataaa
gagaaacgaataaaggaattagaactgcttcttatgtcaacagagaatgaagtaaaccag
aagcaagcactactgaatcatgcagcaagctatcccacgtggcacagtacaactattggt
ggcaacccgagactacatcgacaaagcacacctaactcctgcctaggggaccaacaccat
tccacgccttcaccaccagtggaccacagctgcctgcctgaggagagtgcagccccagcc
cggtgctttggtgtaaacctcttaattcagatgaagaatctgcctgaatactcagaaaca
cagcttatagattctgctccttcttcatgggttgaacacaacagttttgaaatcaatgaa
caagacgattcctcacccagcagcactccctcaggccaaacctcagaatctgaggatgga
gaaggcagcctctgcagcccaaggcttgtgcctgacatagatttaagtgaaagcatgatg
tgtcagggctctccttgctccctaaattctgcagaaagcaccctgtctccgaggatcatc
ttgcacaaaaagagagggcgtctgagctacttagtcagtgaagagcgaggtctcttcagc
ctggctgacctcagcagttctacgcctaaatactccccaatcaaaagtctgcccttctct
ccttcccagttcttaaacacctcagcacaacacgagaatttagaaattgaacactcatct
ctgacttcaactccagtttgttcatctcaaaaaactaccttttccacatctctcctccgg
gaccacacaccacgactccagaaggaaaatcacctcctcagaaccccagccataaaaagg
tccatcctggacagtactccaaggactcctactccattcaaaaatgcattagcagctcag
gaatttaaacatggtcctctaaaactgttgcatcacacaccatcacatcttgctgaagac
atacaggaggttatcaagcaggagtctgatgaatctggcattgtgcctgagcactgtcat
acagaggaacctatactaaaacgtatcaaacaggaggtggaatcacccacgcacaaggtt
ggcaacttttatttttcaagttattgggaaggagaaagcctaaatgctcaacttttcaga
caacagtctgccttggatgatacctcaaatagcattcttaccagttctctactaatgaag
cctgtgtgtgaaaaagaagatcatatattcaaatcttttcctgtacaaagtattaaatcc
ttcacaaaccctctgcagcacctcagtggtacctgggatgtcatgtcttgcggcaagatg
gaagaacaaaagattcttgcagaacaatactgtaaatacataaaaaacttttccacacta
gtgatgtga
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