Xenopus tropicalis (tropical clawed frog): 613110
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Entry
613110 CDS
T01011
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
613110 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
613110 (copb2)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
613110 (copb2)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
613110 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
613110
NCBI-ProteinID:
NP_001027518
Xenbase:
XB-GENE-964668
UniProt:
Q4VA86
LinkDB
All DBs
Position
5:complement(128418964..128436604)
Genome browser
AA seq
920 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEIQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSLVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVATAQETHEGVSEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSTV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVIPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHSAQDYGGLLLLATSSGNATMVNKLAEGAE
KDGKNNVAFLSYFLLGKLDSCLELLISTGRLPEAAFLARTYLPSQVSRVVKLWKESLGKV
NQKAADSLADPTAYENLFPGLREAYAAEPFLKQNSGILLPAKEYRHVTPNEERNILSEAK
GFDPSESAFTAVEKESVEVPNQAVPIPFAVPSPSIPAPEMPAPKSSMDKALFDLEEDLDN
MELDDIDTTDINLDDELSDE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgacttgacatcaagagaaaacttactgctcgctctgaccgagtgaagagt
gtggacttgcacccaacggagccatggatgttggctagcttatacaatggcagcgtctgt
gtatggaatcatgaaacacagactttagtgaagacgtttgaagtctgtgatcttccagtc
agagcagcaaagtttgtggcccgaaaaaactgggttgtcacaggagctgatgacatgcag
atcagggtgttcaactacaacactctggaaagagttcatatgtttgaggcccactctgat
tatatacgatgcattgccgtacacccaacacagcctttcattcttacaagcagtgatgat
atgctgatcaaactgtgggactgggataagaagtggtcctgctcccaggtcttcgaaggt
catacacactacgtcatgcagattgttataaatcccaaggacaacaaccagtttgccagt
gcttccttggatcgcacaatcaaggtctggcagctgggctcctcttctcccaatttcact
ttggagggacatgagaaaggggtcaactgtattgattattacagtggaggtgacaagcct
taccttatttctggggctgatgacagactggtgaagatttgggattaccagaataaaact
tgtgttcagacacttgagggccacgcgcagaatgtttcttgtgtcagcttccaccctgaa
cttcccattatcatcacaggctcagaagatggtacggtgaggatctggcactctagcact
taccggctcgagagtacccttaactatggcatggaacgagtgtggtgtgtgtctggacta
cgaggttctaacaatgtggcacttggatacgatgaaggcagcatcattgttaagttgggg
cgtgaagaaccagcaatgtccatggatgccaatggtaaaattatctgggctaagcactcc
gagattcagcaggcaaacttgaaggccatgggggacacagagattaaggatggggaaagg
cttccacttgctgtgaaggacatgggcagttgtgaaatctacccccaaacaatccagcac
aaccctaatggaagatttgtagtggtgtgcggagatggagaatacattatttacactgct
atggcactgagaaacaagagctttggatcagcacaggaatttgcctgggctcacgactct
tctgaatatgctattcgagaaagcaacagcctggtgaagattttcaagaactttaaggag
aagaagagctttaaaccagactttggggcagaaggtatctacggcggattccttcttggt
gtgcggtctgttaacggtttggctttctatgactgggagaatacagagctcatccgcagg
attgagatccagcccaaacacattttctggtccgactctggagaacttgtgtgcattgct
acagaggaatccttcttcatcctcaaatatttatctgagaaagtagccacagcgcaggag
acccatgagggagtgtccgaggatggaatagaagatgcttttgaggttcttggagaaatt
caggagatcgttaaaactggtctgtgggttggagactgttttatatacacaagcacagtg
aacagactcaactactatgtgggaggagagattgttactattgcacacttagatagaacc
atgtacctgcttggttacattcccaaagataaccgcctctaccttggggacaaggagctc
aatatcgtcagttactcactgcttgtatcagtcttggaatatcagacagctgtcatgaga
agagacttcagcatggctgacaaagtaatcccaactatccccaaagagcagaggacccgg
gttgctcacttcctggaaaaacagggtttcaaacaacaggctttggctgtgtccacagat
cctgaacatcggtttgagctagcacttcagctgggagagcttaagattgcctatcagcta
gctgtggaagcagagtcagagcagaagtggaagcagctggcagagttggccatcagcaaa
tgtcagtttggattggctcaggagtgcctacacagtgcccaggactatggtgggctctta
ctcctcgccacctcttcagggaatgccaccatggtgaacaagctggctgaaggtgcagag
aaagatggaaaaaacaatgtagctttcctaagctatttcttactggggaaattggactcc
tgcttggagctgctcatttctacaggccgcttgcccgaggcagcatttctggcaagaacc
tacctgccaagtcaggtgtccagggtggtaaaattatggaaagagagcctaggcaaggtc
aatcagaaggcagcagactctttggcagaccccactgcatacgaaaatctctttcctggt
ctaagggaagcctatgcggcagaaccatttttgaagcagaactcgggcattctgcttcca
gctaaggaatatcgtcatgtgactccaaacgaagagagaaatatcttgtctgaagcaaag
ggatttgatccatcagaatccgccttcactgcagtagaaaaagagagcgtagaagtccca
aatcaagcggttcccatccctttcgcagtaccatcaccatcaataccagcaccagaaatg
cctgcccctaaaagcagcatggataaggcattatttgacctagaagaggatttagacaac
atggagctagatgatattgacaccacagacattaacttggatgatgagctttccgatgaa
taa
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