Xenopus tropicalis (tropical clawed frog): 733485
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Entry
733485 CDS
T01011
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
733485 (vldlr)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
733485 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
Motif
Other DBs
NCBI-GeneID:
733485
NCBI-ProteinID:
XP_002934223
Xenbase:
XB-GENE-971958
UniProt:
A0A8J0QL29
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Position
1:complement(128058687..128099846)
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AA seq
868 aa
AA seq
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MSRSWRGVVLLLLLCCLHPDLGLVHATKTLCEGSQFQCANGHCITSLWKCDGDEDCSDGS
DESSCVKKTCAETDFVCNNGLCVPRRWECDGDPDCEDGSDETAELCHMRTCRATEISCGA
RSTQCIPLSWKCDGESDCPNAEDEENCGNITCSPAEFTCSSGRCISSTFVCNGQNDCSDG
SDEENCVPPTCGAHEFQCKNSSCIPLNWVCDDDSDCADHSDESLEQCGRQPIAPQKCSAN
EMPCGSGECIHKKWRCDGDPDCKDKSDEMNCPSRTCQPDQFKCEDGNCIHGSRQCDGVRD
CLDGTDEIRCKNVNQCSGPGKFKCRSGECIDIAKVCNKQKDCKDWSDEPIKECYVNECEV
NNGGCSHLCHNLVIGYECDCTAGFKLIDRKTCGDIDECQNPEICSQICVNLKGGYKCECS
KGYQMDPSTGVCKAVGREPCLIFTNRRDIRKVGLERKEYIQLVEQLRNTVALDADIKEQS
LFWADTIQKAIFRAPFDTREKVGTHIKVVEDVHSPSAIAIDWIYKNIYWMDTGLKTISVS
NFDGSKRKTLFNSGLQDPTSIAVDPISGFIYWSDWGEPAKIEKAGMNGIDRQQFVTADVQ
RPSGIAIDVVKSRLYWVDSKLHTLSSVDLNGLDRRVILKSHEFLAHPLALTIFEDRVYWI
DGENEAIYGANKFSGQELETLVNNLNEAQDVIVYHELVQPLGRNWCNEQIENGGCKYLCL
PAPQISDNSPKYTCVCPDGFELNGGRSCRPGSKATMDHTVKPTGILPKKPLPSGDNDTNS
IHEVNLSAKGTSAAWAILPLLLIAMAASGGYLMWRNWQQKNMKSMNFDNPVYLKTTEEDL
AIDIGRHGGNIGHTYPAISVVNTDDDLS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctcctggaggggggttgtcctgctcttgctgctctgctgtctgcacccggat
ctcggcttggttcatgcaacaaaaaccttatgtgaagggtcacaatttcagtgtgcaaat
gggcactgcattacttcattgtggaaatgtgatggagatgaggactgctctgatggcagt
gatgagagttcatgtgtgaagaaaacctgtgcagagactgactttgtctgtaataatggt
ctgtgtgtcccaaggcgatgggagtgtgatggagacccagactgtgaagatggatcagat
gaaaccgcagagctatgccatatgagaacatgcagggctactgaaataagctgcggtgcc
cgttcaacacaatgtatccccctctcctggaaatgtgatggggagagtgactgtcctaat
gcagaggatgaagagaactgtggaaatataacctgtagtccagctgagttcacttgctcc
agtggccgttgcatttccagcacttttgtctgcaatggccaaaatgactgcagtgatgga
agtgatgaagagaactgtgtccctcccacttgtggagctcatgagttccagtgcaagaat
tcttcgtgcatccctcttaactgggtttgtgatgatgattccgattgtgcagaccactcc
gatgagtctctggagcagtgtggtcgccagcctatagctccccagaagtgcagtgctaat
gaaatgccttgtggttctggagaatgcatacacaaaaagtggcgctgtgatggagaccca
gattgcaaggacaagagtgatgaaatgaattgcccatctcgtacttgccaaccagaccaa
tttaaatgtgaagatggaaattgtattcatggcagtagacaatgcgatggtgtgagagac
tgccttgatggtactgatgaaatacgctgtaaaaatgtcaatcagtgctcaggacctggt
aaattcaagtgcagatctggagagtgcatcgatattgccaaggtttgcaacaagcaaaaa
gactgcaaggactggagtgatgagccaataaaggaatgctatgtcaatgaatgtgaagtg
aataatggtggctgttctcatttatgccataacctggtgattggctatgaatgtgactgc
actgctggctttaagctaattgatcggaaaacatgtggagatatagatgaatgccaaaac
ccggaaatctgcagccagatctgtgtgaacctgaaaggtggttacaaatgtgaatgcagt
aaaggatatcagatggatccatccactggtgtttgcaaggcagtaggaagggagccgtgt
ctaatatttaccaaccgccgagatatccggaaggtgggacttgaaagaaaagaatacatc
cagttggtggagcagttaaggaatacagtagccctggatgccgatatcaaagaacaaagc
ttattttgggcagacactatccagaaagctatattccgcgccccatttgacacccgggaa
aaagtaggcacccatatcaaggttgtggaagatgtgcacagtccatcagcaatagcaatt
gactggatctataaaaacatatattggatggatactggtttaaagacaatttcagtgtct
aattttgatggctcaaaaaggaaaaccttgttcaattcggggttacaggatccaacctcc
attgctgttgatccgatttctggatttatttactggtccgactggggagagcctgccaaa
attgaaaaagctggaatgaatggtatagacagacaacagtttgtaaccgcagacgtgcaa
cgacctagcggcattgcaattgatgtggtaaaaagccgtttgtactgggttgattccaaa
ctccatacactttctagtgtggacctcaatggtctggatcgcagggtcattctgaagtct
catgagttccttgctcatcctcttgcacttactatatttgaggatcgtgtctattggatt
gatggtgagaatgaagcaatctatggggccaacaaattttctggccaagaactggaaact
ttagtcaacaatttaaatgaggcccaagatgttatagtctaccatgaacttgtccagccc
ctaggtagaaactggtgcaatgaacagatagaaaatggcggctgtaaatatctgtgttta
cctgctccacagataagtgataattcacctaagtatacttgtgtttgtcctgatggcttt
gaactgaatggaggaaggagctgcaggccaggtagtaaagctactatggatcacactgtc
aaacctacaggaatattgcctaaaaaaccacttccaagtggtgataatgacactaattct
atacatgaggtaaatctgtctgccaaaggaacctctgctgcatgggcgattcttcccctc
ttgttaatagcaatggcagcctctgggggttatctgatgtggcgcaactggcaacagaag
aatatgaaaagcatgaactttgataatccagtgtacttaaagacaacagaggaggacctg
gcaatagatatcggaaggcatggtgggaatataggccacacgtatccagcaatctctgtt
gtaaacacagacgacgacctgtcttga
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