Xenopus tropicalis (tropical clawed frog): 733488
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Entry
733488 CDS
T01011
Symbol
pard6b
Name
(RefSeq) partitioning defective 6 homolog beta
KO
K06093
partitioning defective protein 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
xtr04517
IgSF CAM signaling
xtr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
733488 (pard6b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
733488 (pard6b)
09144 Cellular community - eukaryotes
04530 Tight junction
733488 (pard6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
733488 (pard6b)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
733488 (pard6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
733488
NCBI-ProteinID:
NP_001122111
Xenbase:
XB-GENE-489861
UniProt:
A0A8J0QDF8
B3DM40
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All DBs
Position
10:complement(35721600..35745999)
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AA seq
377 aa
AA seq
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MNRGHRAAGTSSRSLGTVEVKSKFGAEFRRFALEKTKPGKFEEFYGLLQHVHKIPNVEVL
VGYADIHGDLLPINNDDNYLKAITTASPLLRIFLQRKEEADYSAFGTGTLTKKRTVLSTV
LHPELNKKKPHIVISMPKDFRPVSSIIDVDILPETHRRVRLYKHGMDKPLGFYIRDGSSV
RMTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANS
HNLIITVRPANQRNNIVRNSRNSGSSGQSTDSSTSMQGHVTPQQIVQNYLPEDAESDEED
IIIEENGDPQQIPKAIPTSESLESLTLMETYHDSSQNGYIPTNTYRMHLSTTGGSLEQLG
NNHDKKIFEEDGTILTL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggggcaccgggcggcgggtaccagcagcaggtccctgggtactgtagaggtg
aagagcaagtttggggcagaattccggcgctttgcattggaaaagacaaaaccgggaaaa
tttgaagaattctatggattactccagcacgtgcacaaaatcccaaacgtggaagtattg
gtgggctacgccgatattcacggggacttattgccgatcaacaatgatgacaattatctt
aaagcaataacgactgcaagccccttgctccggatatttttgcaaagaaaagaggaggcc
gactacagtgcgtttggcacgggcaccttaaccaaaaagaggactgttctttcaacagtg
ttgcacccagaacttaacaaaaagaagccgcacatagttataagcatgccaaaggatttc
aggcctgtttcatcaatcatagacgtggatatccttcctgaaacccaccgccgggttcgg
ctctacaaacatggcatggataagccccttggtttctacatacgggacggctcaagcgtc
cgaatgaccccgcacggactggagaaagtgcctgggattttcatatcgcggcttgtacct
ggtggacttgcacagagcaccggtttgctggccgtcaacgacgaggttcttgaagtcaac
gggattgaagtttccggaaagagcctcgaccaagttacggatatgatgattgcaaacagt
cacaaccttattataacggtaaggcctgccaaccagaggaacaatattgtccgaaacagc
cggaattcgggaagctctgggcagtctaccgacagcagcacaagtatgcagggccatgtt
acccctcagcagattgtgcagaactatcttccggaagacgccgagagcgacgaagaggac
attatcattgaagagaatggtgatccccaacagattcccaaagccattcccaccagtgag
agcttggaatccttaacgctcatggaaacgtaccacgattcatctcaaaatgggtacatc
ccaacgaacacttacagaatgcacctcagcaccactgggggcagcctggagcaactggga
aataaccacgataaaaaaatcttcgaagaagacggcaccattcttacactgtga
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