Xenopus tropicalis (tropical clawed frog): 733490
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Entry
733490 CDS
T01011
Symbol
hnf1b
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
733490 (hnf1b)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
733490 (hnf1b)
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Ortholog
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GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
HTH_5
Motif
Other DBs
NCBI-GeneID:
733490
NCBI-ProteinID:
XP_002939679
Xenbase:
XB-GENE-485652
UniProt:
F6XA53
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Position
2:complement(74694403..74720550)
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AA seq
561 aa
AA seq
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MVSKLSPLQQELLNALLNSGVTKEDLIQALEDMIPSPSFGVKLENLHMSPEHEADSKPVF
HTLTNGHHHKGKLSGDEGSEDGDDFDTPPILKELQSLNTEEAAEQRAEVDRMLSEDPWRA
AKMIKGYMQQHNIPQREVVDITGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILR
QFNQTVQGSGNIADKNSQDQLLFLFPEFNQQNQVPGQPEDSCSEPANKKMRRNRFKWGPA
SQHILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFA
NRRKEEAFRQKLAMDAYSTGPSHPHNLNSLLSHGSPHHTQPSTSPPSKLQGVRYNQQGNN
EVTSSSTISHHGSNAMVTSQSVLQQVSPVGLDHSHGMLSPDGKLISVSGGGLPPVSTLTN
IHNLSQSVHHNPQQSQNLIMAPISGVMAITQNLNTSQAQSVPVINSVAGSLAALQSVQFS
QQLHSPHQQQLMQQSPGHMAQQPFMATVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTD
TSSISTLSNMSSSKQCPLQAW
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtatccaagctatcgcctttgcagcaggaactcctcaatgctctcctcaactctgga
gtaaccaaagaggacctgatccaggccttggaagacatgatccccagcccaagctttggg
gtgaagctggaaaacttgcacatgtccccggaacatgaggctgacagtaagcctgtattc
cacactctcaccaatgggcaccaccacaagggcaagctctccggggatgagggctcagag
gatggagatgactttgatacccctccaatcctaaaagaactgcagtccctcaatacggag
gaggcagcagagcaaagggcagaagtggacaggatgttgagtgaggatccatggagagct
gcaaaaatgataaagggttatatgcaacagcacaatattcctcaaagagaagtggtggat
attaccggcttaaaccagtcccatctttcccaacacttaaacaaagggacaccaatgaag
acccaaaaacgtgctgcattgtacacttggtatgtgaggaaacaaagggagatattaaga
caattcaaccagacagtccaaggctctggaaatattgcagacaaaaacagtcaggatcag
ctgctgtttctctttccagagtttaatcagcaaaatcaagtgccaggacagcccgaggat
tcttgctcggagcccgccaacaagaagatgaggcgaaatcgtttcaaatgggggcctgca
tcacagcatattctttaccaagcctatgaaaggcaaaagaatcccagcaaagaagaaaga
gaagctttagtggaagagtgtaacagagcggaatgtcttcagcgtggtgtatctccttct
aaagctcatggccttggatcaaatttggtaacagaagtccgtgtttataattggtttgca
aacagaaggaaagaggaggcttttagacaaaaactagctatggatgcctatagtactggc
ccatcacacccacacaacttgaattctctactgtcacatggatcaccacaccatacgcaa
ccaagcacttctccaccaagtaaactgcaaggggtaagatataatcaacaaggaaacaat
gaagttacttcatcgtcaaccatcagtcaccatggcagcaatgctatggtgaccagccaa
tctgttttacagcaagtttctccagtgggcttggatcacagccacggcatgctttcacct
gatggcaaactgatatctgtttctggaggaggattaccgccagtgagtacactgaccaat
attcacaacctgtcccagtctgttcatcacaatcctcagcaatctcaaaaccttatcatg
gcaccaatctccggagtgatggcaattacgcagaatttaaacacctctcaggcgcaaagt
gttcctgttatcaacagtgttgcagggagcctggcagctttacaatctgtacagttttca
cagcaactacatagtccacatcagcagcaactcatgcaacagtcccctgggcacatggca
caacagccatttatggccactgtcactcagcttcagaattcacacatgtatgcacacaag
caagagcctccccagtattcccacacatctcgttttccttcagccatggttgtcacagat
actagcagcatcagcacattatcaaacatgtcttccagtaaacagtgtcctttgcaagca
tggtga
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