Xenopus tropicalis (tropical clawed frog): 733720
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Entry
733720 CDS
T01011
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
733720 (brwd3)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
733720 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_DCAF4
DUF5320
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
733720
NCBI-ProteinID:
XP_002940482
Xenbase:
XB-GENE-5757854
UniProt:
F7CJI0
LinkDB
All DBs
Position
8:64186209..64243059
Genome browser
AA seq
1778 aa
AA seq
DB search
MEAELYFLIARFLQSGPCRRSAQVLAEELEEYRLIPPRLDWEGKEHRRTYQDLVAANKHI
PSDYLLKICERFGPILDQEIPQSVPGLHSLLGLGKQSLLRSKKDCKNTPWKGTAFAALHR
GRPPELPVNYGKPLNVVNITCARYQTGYAHYHRIFPSSTYQQMKMHKRILGHLSSVYCVA
FDRTGRRIFTGSDDCLVKIWASDDGRLLSTLRGHSAEISDLAVNHENTLIAAGSCDKVVR
VWCLRTCAPIAVLQGHTASITSIQFCPGTKEKTRYLTSTGADGTICFWEWHADTMTFNDR
PVKFAERSRPGVQISCSSFSSGGMFIATGSTDHVIRIYYLGSGSPEKIAELEAHLDKVVA
IQFCNNSDRLCFVSGSRDGTARIWQYQQQEWKMTVLDMTAKMAGSSVINTEDKVTKLKVT
MVAWDRSDSSVITAVNNFFLKVWNSHTGELLHILSGHDDEVFVLEPHPFDPRILISAGHD
GNIFVWDLETGTKIRNYFNMIEGQGHGAVFDCKFSPDGQNFACTDSHGHLLLFGFGCSKP
YEKIPEQMFFHTDFRPLIRDSNSYVLDEQTQQAPHLMPPPFLVDVDGNPHPTRFQRLVPG
RENCKDEQLIPQLGYMSNGNGDVVEQVIGQQTGNQEESILDGIIRELQREQDERHTNEAE
DVDTPRYNRTDSRNGVLRSISLDLSSPPNVGLRRSGQIEGVRQMHSNAPRSQIATERDLM
AWSRRVVVNELHPGVIRVQEECRISKGEMEISLYNTEKKRKPTNPAQRNDYQAFGGRSLR
RIQRKRQHAYQTRSTIEHDARAKVPSTNGEDSQSSPEEEESQHSTEASGDEAAAQWQSET
SSSNSSSEYSDWTADAGINLQPPKRQTRQTTRKMCSSSEDENAKEEEKPRKHKLTRRKKQ
SERLSMEGEPSEEWIPPQWILDTIPRRSPFVPQMGDEVIYFRQGHEAYVRAVRKAKIYNI
NPQKEPWNKTDLRDQEFAKIVGIKYEVGPPTLCCLKLALLDPTSGKITADSFSVKYHDMP
DVIDFLVLYQFYKEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQTEYPDSLFQCYSVH
WDNNERENMSPWDMEPIPDGTALPDEMGAGVPVTSDELKSLQYKPEEGEWGLYSRDEVCE
RVIQGIDQLLTLDFASPFSAPVDLSAYPLYCTVVAYPTDLSTTRKRLESHYYRRLSALIW
EVRYIEHNARTFNEPDTPIVRTAKIVTDVLLRYIGDENCNDILEIYNQVKTEDTGNTEDE
EGGAVDMESDAPGTSSGRAVTRRTKRDLLRSNPDSWKDKCKELLDLIYEREDSEPFRQPV
NQVSYPDYQDIIETPMDFSTVKTTLEAGNYSDPLEFAADVRLIFSNSKAYTPNKKSRIYS
MTLRLSALCETYIKDIISDYKLAMQLQQRTRRKYRRRIRSSSSSSSSSSSSSNRRRSSSS
SSSSSSASSRASSPDTKPRKMKLQPKLNQNPPHPLPRSSSSSTSQMSDTDVEPDGKPFSE
DMDQEPSSSGCSKPETHKEQENVTKSKNSPVKEEHTNGPLTNGDGGNTPKTKRKLLSSSE
DESPEDGEQMEEKPDKSPACSRERDSESSLSSKSESESESSSDSESIKSDQDYIDGDHHY
SKEPRTKFKRKFCKSGEAKTRGRGRGRGRGRGRAKGYNRGVEEELKKGRGRGRGRGRGAW
KKEPSRTPALKRAQLTDDEDDDNVDDEESDCVEQRRKKPRINTRNQGRRTVLYNDESDNE
HDGAGQYDDPLNLGTSRSGRVRKMTEKARVSHLMGWNG
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgagctttacttcctgatcgcccgcttcctacagtctggcccctgccggaga
tccgcacaggttctggcggaggaactggaggagtaccggctcatcccaccgcgcttagac
tgggaagggaaggaacaccgcagaacttatcaggatttggtggcagccaataaacacatc
ccatcagactacctgcttaaaatctgcgagcgttttggacctatcctagatcaagaaatc
ccgcagagtgttcctgggttgcatagtctgttgggacttggaaaacagtcactgctcaga
agtaaaaaagactgcaagaatacaccatggaaagggacagcttttgcagctttgcacaga
gggagaccaccagaacttccagtcaactatggcaagcccctcaacgttgtaaatatcact
tgcgccagatatcagactggatatgcacattaccatcgcatatttccatcttcaacttat
cagcagatgaaaatgcacaagaggattttgggccatctttcatctgtatactgtgtggct
tttgatcgcactggaagacgtattttcactggttcagatgactgtctagtcaaaatatgg
gcaagtgatgatggacgtcttctttccacactacgtggccattcagctgaaatctctgat
ctggctgtgaatcatgagaatacattgattgctgctggcagctgtgataaggtggtgcgt
gtgtggtgccttcgtacatgtgcaccaatagctgtgctgcagggtcatacagcttctatc
acttccatacagttttgcccaggaacaaaagaaaaaacaagatacctcacatctactggt
gctgatgggacaatctgcttctgggagtggcatgcagataccatgacatttaatgatcgc
cctgtgaaatttgcagagaggtccaggcctggggttcagatctcctgctcatcctttagt
tcaggtggtatgtttatagccacaggaagtactgatcatgtgataagaatatactacctg
ggatctggttcaccagagaagatagctgaattggaagcacatttggacaaagtggtcgct
attcagttctgcaacaattcagatcgattgtgctttgtcagtggaagcagagatggcact
gctcggatttggcaatatcagcagcaagagtggaaaatgactgttctggatatgactgcc
aagatggctggaagcagtgttataaatacagaagacaaagtgaccaagcttaaagtcact
atggtagcatgggaccgatctgattcttcggttattactgctgtaaacaatttctttctg
aaagtttggaactctcatactggcgaacttcttcatatattgtctggccatgatgatgaa
gtttttgttttggaacctcatccttttgatccaaggattttaatctctgctgggcatgat
ggaaacatatttgtgtgggacctcgaaacaggaaccaaaattcgtaattactttaacatg
attgaaggtcagggtcatggagccgtgtttgactgtaagttctcgcctgatggtcaaaac
tttgcctgtacagattctcatggacatcttttactctttggttttggttgcagtaaacca
tatgaaaagattccagaacagatgttcttccatacagactttagacctctaataagagac
tccaacagctatgttttggatgaacaaactcaacaagccccacacctaatgccccctcca
ttcctagtagacgttgatggcaacccacatcctacccgttttcagcgcttggtgccagga
cgtgagaattgtaaagatgagcagctcatacctcagctgggatacatgtcaaatggcaat
ggcgatgtggtggagcaggtcattggccagcaaacaggaaaccaggaggaaagtattctt
gatgggataatccgagaactccagagggaacaggatgagaggcatacaaatgaagccgag
gatgtggatacacccagatataacagaacagactcgagaaatggagtattaagaagtatt
agcttggatttatcatctccacctaatgttggccttcgccggagtggccaaattgagggt
gttcgccaaatgcatagtaatgcacctcggagtcaaattgcaacagaaagagacctaatg
gcctggagcagaagagtggtagtaaatgaactgcatcctggtgttatcagggtccaggaa
gaatgcagaatttctaaaggcgaaatggaaatcagtttgtacaacacagagaaaaagagg
aaaccaactaaccctgctcagaggaatgattatcaagcttttggtgggcgatcacttaga
cgaatacagcggaagcgccagcatgcctaccagacacgttcaaccattgaacatgatgca
agagctaaagttccaagtacaaatggggaagattcgcagagttcccccgaggaggaggag
tcccaacattcaacagaggcttcaggagatgaagctgcagctcagtggcaatcagaaacc
tcttccagtaattcatctagtgaatattccgactggactgcagatgcaggaatcaatctc
cagcctcccaaaagacagacacggcaaacaacaaggaaaatgtgcagcagttcagaggat
gagaacgctaaagaggaagagaagccgaggaaacacaaactgaccagacggaagaaacaa
agtgagcgtctttctatggaaggagagccaagtgaagaatggattcccccccagtggatc
ttggacaccatcccacgtcgttctccttttgttccccagatgggagatgaggttatttat
ttcagacaaggccatgaagcttatgtacgagcagtaaggaaggctaaaatatataatatt
aatccacaaaaggagccatggaacaaaacggatctcagggatcaagaatttgctaagatt
gtaggaattaagtatgaggtggggccgcctacattatgctgcttaaaacttgccttactg
gatcctacttcaggcaaaataactgcagactctttctctgttaaataccatgacatgcct
gatgttattgacttccttgtcctttaccagttttataaggaggcgaaagagagaaactgg
cagataggagaccggtttcgaagcattattgatgatgcatggtggtttggcacagtggaa
agtcagcagccattccagactgagtatcctgacagtttattccagtgctacagtgtacac
tgggataataatgaaagagaaaacatgagtccttgggacatggaaccaattccagatggc
acagctttgcctgatgaaatgggtgctggtgttcccgttacttccgatgaactgaagtct
ttgcagtataaaccggaggagggagagtggggattgtactcaagagatgaggtttgcgaa
agagttatccaaggaattgatcagctacttactcttgattttgccagcccattcagtgct
cctgtggatctcagtgcctaccccttatactgcactgtggtagcatacccaacagatcta
agcaccacaaggaagagactggagagccactactataggaggctttctgccctaatatgg
gaggtccgctatattgaacacaatgcaagaacattcaatgagcctgacactccaattgtt
agaactgccaaaattgtgacagatgtgctgttgcgttatattggggatgagaattgtaat
gatatattagagatctacaatcaagtaaagactgaagatactggcaatacagaagatgag
gagggtggagcagttgatatggaatcagatgccccagggacatcatctggtcgggctgtt
acccgtcgcactaaaagagatctacttcgttccaatcctgattcatggaaagataaatgc
aaagaactactagatttaatatatgagcgggaagattctgaaccctttaggcaaccagtc
aatcaagtctcatatcctgattatcaggatattattgaaacaccaatggattttagcacc
gtgaaaacaacgttagaagctggaaattatagtgacccgttggaatttgctgcagatgtt
cgactaatcttcagtaactccaaagcatacactccaaacaaaaaatctagaatctacagt
atgactcttcgactctctgcactatgtgaaacctacataaaggatatcatctctgactac
aaactagccatgcaactccaacagagaacaaggcggaaatacagaaggcgaattaggagc
agcagcagcagcagcagcagcagcagcagcagtagtaatagaagaagaagtagtagtagt
agtagtagttctagttcagcatccagcagagcatccagcccagacacaaaacctcggaaa
atgaagcttcaaccgaaacttaatcagaaccctccacatcctcttcctaggagcagctct
tcatccacttctcaaatgtctgatactgatgtagagcctgatggaaagcctttttctgaa
gatatggatcaagagccatcttcatctggatgcagcaaacctgaaacacacaaagaacag
gagaatgtgaccaagagcaaaaattctcctgtgaaagaggaacatacaaatggccctcta
acaaatggcgatggaggaaacacaccaaaaaccaagagaaagttgctaagttcttctgag
gatgaaagtccagaagatggagagcaaatggaagaaaagcctgataaaagtccagcatgt
tctcgtgaaagagactctgaatcaagtttaagttcgaagagtgagtcagaatcagagagc
agttctgattctgaatccattaagtcagatcaggattatattgatggcgaccatcattat
agcaaagagccccgtacaaagtttaagagaaaattttgtaaatctggagaggctaaaacg
agaggaaggggtcgaggaagaggcagaggaagaggacgtgcaaaaggttataatcgtggt
gtggaggaagagttaaaaaaaggtaggggccggggcagaggaagaggaagaggagcatgg
aaaaaagaaccttcaaggacaccggcattaaaacgtgcgcaattgacagatgatgaagat
gatgacaatgtggatgatgaagaaagtgattgtgtagagcaacgaagaaaaaaacctagg
ataaacaccaggaaccagggcagaagaactgtgttatataatgatgagtctgataatgag
catgatggtgcggggcaatatgatgatcccttaaacctgggaacatccaggtctggaaga
gtgagaaaaatgacggaaaaggccagagtgagtcatctgatgggatggaatgggtga
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integrated database retrieval system
