KEGG   Xenopus tropicalis (tropical clawed frog): 733792
Entry
733792            CDS       T01011                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03050  Proteasome
xtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    733792 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    733792 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    733792 (sem1)
   04131 Membrane trafficking [BR:xtr04131]
    733792 (sem1)
   03051 Proteasome [BR:xtr03051]
    733792 (sem1)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    733792 (sem1)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     733792 (sem1)
Membrane trafficking [BR:xtr04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    733792 (sem1)
Proteasome [BR:xtr03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     733792 (sem1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     733792 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 733792
NCBI-ProteinID: NP_001039037
Xenbase: XB-GENE-1016350
UniProt: Q28EZ1
LinkDB
Position
6:complement(33751557..33755349)
AA seq 71 aa
MSSDKKAPVDLGLLEEDDEFEEFPAEDWTGLDEDEDTHVWEDNWDDDNVEDDFSNQLRAE
LEKHGYKMETS
NT seq 216 nt   +upstreamnt  +downstreamnt
atgtcgtctgataagaaggcaccggttgatttgggtcttctggaagaagacgatgagttc
gaagaatttcccgccgaagactggacgggattagatgaagatgaagatacacatgtctgg
gaggataactgggatgatgacaatgtagaagatgatttttcaaatcagttaagagctgaa
ttagagaaacacggatacaagatggagacatcatag

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