Xenopus tropicalis (tropical clawed frog): 733805
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Entry
733805 CDS
T01011
Symbol
parpbp
Name
(RefSeq) PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
733805 (parpbp)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
733805 (parpbp)
TLS (translesion DNA synthesis) factors
Other TLS factors
733805 (parpbp)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD_C
P53_tetramer
Motif
Other DBs
NCBI-GeneID:
733805
NCBI-ProteinID:
NP_001039039
Xenbase:
XB-GENE-1004674
UniProt:
Q28EM3
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All DBs
Position
3:49131970..49146486
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AA seq
573 aa
AA seq
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MDCPLENVLDLIKYFRKEWPVVSDSERTTIYGADNMLLTLQLALAEVNKQNGKEFSASLS
DVLLTWKCLVKHKLGLAYEDTAVPENYADIRKTYELFLKTSNSLDLIDIYEKISTLGSSE
PHNFTSEQLLEFLTEDECFSGDKDFPVVSTPCKNNFDVVKVKATLKRIFLAYLNLLVNSK
NDFALAQVLNCPERGLGREAFTDLKHTSRMKNMSLFLVATSFIRTIELGGKGYAPSESDP
LRKHLKGLSLFVHFVDRLNEVLGETNDPRTAGELLLSTIKMHLIKGRSSGDPLSEAATDV
AQDLDLRIKNLINLLSEDKYSVTPGISPARPKIHAINRGTASGGREMIKTLLKLLDEEAA
NPPSKNKADLLCADEENTLFGAVSLFTLFRSPEQKNGSSPKPLSHRVQKAMDKNKPKLKQ
NLIRSQFACTYKDSNLAQIKQWDFPSLSQVPTCIHPAPRIVPVLCFDEEPLENSDLQKQE
LKLSSGNIDLKTGGQVKNKPCKNVANKRSKRKQVDIQSETTNAQENEPPQKKAVVEITSK
KENKPCVPRNCNKSSSKNKLIAGQAKLTSFFRV
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggactgtccacttgaaaatgtgttggatttaatcaaatactttcgaaaagagtggcct
gttgtgtctgattctgagagaacgacaatatatggagcagacaatatgcttctgacttta
cagctggctcttgctgaggttaataaacagaatggcaaagaattttctgcttctcttagt
gatgtgctgctaacatggaaatgcttagtaaaacataagcttggcctggcttatgaagat
acagcggttcctgagaattatgcagatatcagaaagacatatgaattgttcctgaaaacc
agtaattcattggatttaattgatatttatgaaaagatctctacacttggttccagcgag
ccacataactttacttctgaacagctattagaatttctcactgaagatgaatgcttttca
ggagataaagattttccagtggtatcaactccctgtaaaaataactttgatgttgtgaag
gtaaaggcaacactgaaaagaatatttcttgcttatttaaatctgctggtgaactctaaa
aatgattttgccttggcccaagtacttaattgcccagagaggggattaggaagagaagcc
ttcactgaccttaaacacacctcacgaatgaagaatatgtcccttttcttggtggctaca
tctttcataagaacgattgagcttggaggtaaaggttatgcaccatctgagtcagatccc
ttaaggaaacacttgaaaggactttctctttttgttcactttgttgatagacttaatgaa
gttcttggagagacaaatgatccaagaacggcaggggagctgttattgtcaaccatcaag
atgcatctcataaaaggcagaagcagtggggatccacttagtgaggctgcgactgacgtt
gcacaagacctggatctgaggattaaaaaccttattaatttacttagtgaggacaaatat
agtgtcaccccaggcatcagcccagccaggcctaaaattcatgcaataaaccgtggcact
gcttcaggtggtagggaaatgataaaaactctgttgaaacttttggatgaggaagctgca
aatccccctagcaaaaacaaagcagatcttctttgtgctgatgaagaaaatactcttttt
ggagcagtttctctctttaccctatttaggtctcctgaacagaaaaatggttcttccccc
aaacctctaagccatcgtgtgcagaaagccatggataaaaataagcctaagttgaaacaa
aacctaatcagatctcagtttgcctgcacctataaagacagtaatttggctcaaataaaa
caatgggattttccaagtctgagccaagttccaacttgtattcatccggcaccaagaatt
gttccagtgctttgttttgacgaggagccattagaaaatagtgatttacagaaacaagag
cttaaattaagttctggaaatattgacctgaaaactggtgggcaagttaagaacaaacca
tgcaaaaatgtggcgaacaaaaggtcaaagagaaagcaggtggacatacagagtgaaacc
actaatgcacaggagaatgaacccccacaaaagaaagcagttgttgaaataacatcaaaa
aaggaaaataaaccgtgtgtaccaagaaactgcaataaatcttcatcaaagaacaaacta
attgccggacaagctaaattaaccagtttcttccgggtgtaa
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