Xenopus tropicalis (tropical clawed frog): 733826
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Entry
733826 CDS
T01011
Symbol
nbn
Name
(RefSeq) nibrin isoform X2
KO
K10867
nibrin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03440
Homologous recombination
xtr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
733826 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
733826 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtr03032
]
733826 (nbn)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
733826 (nbn)
DNA replication proteins [BR:
xtr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
733826 (nbn)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
733826 (nbn)
BRCA1-C complex
733826 (nbn)
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
PTCB-BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
733826
NCBI-ProteinID:
XP_002934471
Xenbase:
XB-GENE-943036
UniProt:
A0A8J0QNP8
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Position
6:complement(126290803..126326575)
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AA seq
760 aa
AA seq
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MWRLVAERAGGDTYYILTGTDYVVGRKNCAILIPDDQSISRCHATLSVSYPSASLSQTNA
VSVLTIKDSSKYGTTVSGERMQPAVPRSLKPSDEVIFGCFHSKYRVEYEPLVVCSSCLDN
TEKNSLKQNLIHLGGHMLNNWTEKCTHLVMTSIKVTIKTICALICCKPIIKPDYFRELIN
AIQQKRPLPEYRSFIPPIDEPSLNPESLDLSENVKRKSIFKDKVFLFLNTKQYMKLSPAV
LLGGGKAHLLESLTDTSVLENSTTCVIDVAMTETQLSETQSTQPWISCTLDLLHSKGLRA
IPEAEIGLAVINVSTEIYCNPRRLAASGNEAETSKRTQVLSSTLSQGMTVDETVLPAPAL
NMTAYVADTEPQDQTDTGMNISGVREVKETPGSSSSHSRSRSCIEKEPKSGSSNDLRQAL
FQGDKTETRNKNNHPLLPIKPSARDVGKTSQKLQPTKKIDSYFQSLAKKRDRDEDEKEVS
SAKLARVEPVSSQNTEEQFRPITEALDKEEDNFDSDLDMELAMSCDQILMGSNKVIPEDP
TMKKRKVPDDHVVEESDIDSDEGISANAEQNDTESNLNKTKKRKLDSKIEGVKELTIKPH
EIGTKAQAKTNTPEMEPSVKKEIEVKTEFEVKKEPESPQKETKCVPDLAGESDALPSRLL
LTEFKSLVVTRPVRNNNTTSNSSNENCQNFKKFKKVAYPGAGSFPHIIGGSDLIAHDRKR
NAELEQWLRQEVEEQTQQAKEESLAEDLFRYNPKSNKRRR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggctggtagcagagagagcaggaggggacacatattatattcttactggcact
gactatgttgtggggcgcaagaactgtgccatcttaattccagatgatcagtccattagt
aggtgccatgctacattgtctgtcagttacccaagtgccagcctgagccaaacaaatgca
gtttcagtcctaacaattaaagactcctcaaagtatggcacaaccgtcagtggagaaagg
atgcaaccggctgttccaaggagtttgaaaccaagcgatgaggtcatatttggttgtttt
catagcaaatatagggtggaatatgagcctttagtggtctgctcttcctgcttagataac
acagagaagaattctttaaaacaaaacctcatacatttaggcggccacatgttaaataac
tggacagagaagtgcactcaccttgttatgacttccattaaagttactatcaagactata
tgtgcactcatttgctgcaaaccaatcataaaaccagattacttccgcgagctgatcaat
gccattcagcagaaaaggccattgcctgagtatagaagtttcatccctcctatagatgag
ccgtcacttaacccagaatcactggatctttctgaaaatgtgaaacgaaaatctatattc
aaggataaagtcttcctttttctaaatactaaacagtatatgaagctgagccctgcggtt
ttgttaggtgggggaaaggcacatctgctggagtcactgacagacacatcagtattggaa
aattctacaacatgtgtaatcgacgtggctatgacagagactcagctctctgaaacccag
tctacacagccctggatcagttgtacactggacttattgcacagtaagggcctgagagca
attccagaagcagaaattggtttggctgttatcaatgtgtcaacagaaatatattgcaat
cctcgaagactggcggcaagtggaaatgaggccgaaacatcgaagagaacacaagtcctg
agttctaccctttcccaaggcatgactgttgatgagactgtattacctgctccagcgctt
aacatgactgcttatgttgctgatacagaaccacaagaccagacagacacagggatgaac
atcagcggtgtgcgtgaagtaaaagaaaccccaggaagcagtagcagtcacagtagatcg
agaagttgcatagagaaggaaccaaaaagtggcagcagcaatgatctcaggcaggctcta
ttccaaggggataaaactgagaccaggaataaaaataatcacccactcttacccataaaa
ccttctgctcgagatgtggggaagacttctcaaaagctgcagccaactaaaaaaatcgac
agttactttcagtccttagccaagaaaagggacagggatgaagatgaaaaggaagtatct
tcagcaaagttggccagggtggaaccagtttcatcccaaaatacagaggaacaattccga
cccattacagaagcacttgataaagaggaagataattttgactccgatctagatatggag
ctagctatgtcatgcgatcagatactaatggggagcaacaaagtgattccagaagatcca
acaatgaaaaaaagaaaggtgccggatgatcatgtagtggaagagtctgatatagatagc
gatgaaggcatcagtgccaatgcagaacagaatgatactgaaagtaatctaaacaaaaca
aaaaaaagaaaactagattctaaaatagaaggtgtcaaagagctcactataaagccccat
gagattggaacaaaggcacaagcaaagacaaatactccagagatggagccatcagtaaag
aaagagattgaggtcaagacagaatttgaggtcaagaaagaacctgaatctccacagaaa
gaaactaagtgtgttcctgaccttgctggggagagtgatgcactgcccagcagactccta
cttactgagtttaagtcattggttgtcactcggccagtcaggaacaataacaccacaagc
aatagcagcaatgaaaactgtcagaattttaagaaatttaaaaaggtagcatacccagga
gctggaagctttcctcatattattggagggtcagatttaattgcgcatgatagaaagaga
aatgcagagctggaacagtggctgcgccaggaagtggaggaacaaacacaacaagccaaa
gaagagtcacttgctgaggatttgttcaggtacaatcccaaatccaacaaaagaagacgc
taa
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