KEGG   Xenopus tropicalis (tropical clawed frog): 733856
Entry
733856            CDS       T01011                                 
Symbol
bicc1
Name
(RefSeq) protein bicaudal C homolog 1 isoform X1
  KO
K18756  protein bicaudal C
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    733856 (bicc1)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     733856 (bicc1)
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_2 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 733856
NCBI-ProteinID: XP_031761084
Xenbase: XB-GENE-488512
UniProt: F7CAX7
LinkDB
Position
7:15778081..15963811
AA seq 973 aa
MAAQCDTIGGYMNQSDPGSNSERSADSPLPGSEDDSPGSAVPHDPEWGEERFRVDRKKLE
TMLQAAAEGKGKSGEDFFQKIMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKKENVKEAK
ERIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEK
SNQVSIAGQPAGVESARVRIRELLPLVLMFELPIAGILQPIPDPNSPTIQQISQTYNITV
SFKQRSRVYGATVIVRGSQNNTSAVKEGTAMLLEHLAGSLATAIPVSTQLDIAAQHHLFM
MGRNGCNIKHIMQRTGAQIHFPDPNNPLKKSTVYLQGTIESVCLARQYLMGCLPLVLMFD
MKEEIEVEPQCITQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLGLDS
SGVTVTNQSTISCPVPMNCHGLDILAAGLGLSGLGLLGPNTLSVNSTTAQNTLLNALNSS
VSPLHSPSSAAPSPTLWATSLANTSNATGFPAIPHLMIPSAAQATLTNFLLSGVPNYGQN
TPSPPPGLTPVDVHMNGIHSECKKVTSALNGHVKPTNMKYGTISSSSLGDKVLNANLAEA
SRQSNNHGSADEVNSKTDSEGCNDAFVEVGMPRSPSHSANTKDLKQMLNSTKAPCPTRQT
VKLLHGAKNSHLHTAERLLSDSEMSPPEGHMTDKKAPGSERAAERAAAQQNSERARLTSQ
SAYGNMQAYDYEQKKLMATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANH
VSYKPTMTTTYEDSSMSLSRSDSREQLGNGSDSDNWRERNGLDSSHNDYSSSIGSPKRKQ
NKSAEHYLSSSNYMDCISSLTGSNGCNLNSSFKGSDLPELFSKLGLGKYTDIFQQQEIDL
QTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPTNIRSSFLEGGASGRLPR
QYHTDIASVSGRW
NT seq 2922 nt   +upstreamnt  +downstreamnt
atggcggctcagtgcgacactatcggcggatacatgaaccagtcggacccgggctccaac
agcgagcggagcgctgactcccctctcccgggctcagaggatgattcccccggctcggcc
gtgccccatgatccggaatggggagaggagcggttccgagtggatcggaagaagctggaa
acgatgctgcaggctgctgctgaaggaaaaggaaaaagtggggaagatttctttcagaag
attatggaagagacaaacacacagatcgcttggccgtccaagctgaagattggggcaaag
tcaaagaaagatccgcacattaaagtctctggcaagaaagaaaatgtgaaggaagcgaag
gaacggatcatgtcagtgctggacactaagagtaatcgggtgacgctgaagatggacgtg
tcacacacggagcattcgcatgtcattgggaaaggcggtaacaatatcaagaaggtgatg
gaagaaacgggctgccacatccatttcccagactccaacaggaataaccaagcagagaaa
agcaaccaggtgtcgattgcagggcaaccagctggtgtggagtctgcaagagtacgaata
agggagctgctgcctttggtactgatgttcgagctgcctatagccgggatcctgcaacca
ataccagaccccaactctcccacaattcagcaaatatcccaaacgtacaacataacggtc
tctttcaagcaacgctcacgtgtctatggtgctactgtcatagtgagaggttcccagaat
aacaccagcgctgtgaaggagggtacggcaatgctgcttgaacatctagctggcagcctg
gctactgccatccccgtcagcactcaactggatatcgctgctcaacatcacctcttcatg
atgggacgcaatggttgcaacattaagcacatcatgcaaagaacgggtgctcagattcat
ttccccgatcctaataaccccctaaagaagtctactgtctacctccaaggcaccattgag
tctgtttgtcttgctaggcagtatctcatgggctgccttcctcttgtgttgatgtttgac
atgaaggaagagattgaagtagagccgcagtgcatcactcagctcatggaacagttagat
gttttcatcagcattaaacccaaacctaagcagccgagtaaatctgtgatagtaaaaagc
gtggaacgaaatgccttaaacatgtacgaagctagaaaatgcctccttggacttgatagc
agcggagtaaccgttacaaaccagtctacaatatcctgtccagttccgatgaattgccat
gggctggatattttggcagcaggcctaggtctctctggattaggtctcttgggtcccaac
accctttcggttaattccactaccgctcagaatactctgctgaacgccctgaacagctct
gtgagccctctgcatagtccaagctctgctgcccctagcccaacgttatgggccacttcg
ttagctaatacatcaaacgcaacaggcttcccagcaataccccatttaatgatcccgtct
gctgcacaagcaacgctcaccaacttcttgctctctggggtaccaaactacgggcagaac
acaccatctccacctcccgggctgacgcctgtcgatgtccacatgaacggcatacactct
gaatgcaagaaggttacatcggcgttgaatggtcatgtgaagccaacaaatatgaaatat
ggaacaatatcttcttcatctctaggagacaaggtgttaaatgccaatcttgccgaggca
tcgcggcagtcaaacaaccacggctcggccgatgaagtgaattccaaaacagattcagaa
ggctgtaacgatgcctttgtggaagtgggcatgcccagaagtccctctcattccgccaac
accaaggatctcaagcagatgctgaactctaccaaagctccatgtccaacaagacagaca
gtaaaattgttacacggggccaaaaattctcacttacatactgcagaaaggttgctttcg
gattcagaaatgagtcccccagaaggtcacatgactgataaaaaggcccctggaagtgaa
cgggctgcagaaagagcagctgcccaacagaattccgagagggcacggcttacttcccag
tcggcatatggcaacatgcaggcctatgactacgaacagaagaagctgatggcaacaaag
gccatgttaaaaaagcctgtggtgacagaagtgaggaccccaacaaacacgtggagtggg
cttggcttctccaaatctatgccagcggaaaccattaaggaactgagacgggccaaccac
gtatcgtacaagccaaccatgacaacaacatacgaggactcttcgatgtctctttctcgg
tctgacagccgggagcagctgggaaacggcagcgactcggataactggagggaaaggaat
gggcttgactcatctcacaacgactactcatcctccatagggagtcccaagcgaaagcaa
aacaaatctgcagaacactatctaagcagcagtaattacatggactgcatttcctcactg
actggaagcaatggatgtaacctaaacagttcattcaaaggttccgatcttcctgaactc
ttcagcaaactgggcctggggaagtacaccgacatattccagcagcaagagattgatctt
cagacattcctcacgttaacagatcaggatttaaaagaacttggcattacaacattcggt
gctcgaaggaaaatgttgctggctatctcagaactgaataaaaaccgaaggaagttattc
gagcccaccaatatccgctcctcgtttctggagggtggagccagcggcagactcccaaga
caatatcacacagacattgcgagcgtcagtgggcgctggtag

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