Xenopus tropicalis (tropical clawed frog): 733925
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Entry
733925 CDS
T01011
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00100
Steroid biosynthesis
xtr01100
Metabolic pathways
Module
xtr_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
733925 (lss)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
733925 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-GeneID:
733925
NCBI-ProteinID:
NP_001073038
Xenbase:
XB-GENE-5786978
UniProt:
Q0IHW7
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Position
9:complement(61031577..61054245)
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AA seq
730 aa
AA seq
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MSGETCLRRRGGPYKTAPATDLTHWRLSCTEGRQTWCYVEEEDRKQTVLEAHSLGLETSD
LLKDLPPPQTAYDGAYNGITFYSALQAEDGHWAGDYGGPLFLLPGLLIACHVTKTSLPDA
TKKEMIRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTSLRLLGVSQDDLDLTRARNNLLS
KGGAVGIPSWGKFWLAVLNVYSWEGMNTLFPEMWLLPHWFPAHPSTLWCHCRQVYLPMSY
CYATRLSAHEDDLIRSLRQELYLEDYSSINWPAQRNNVASCDIYTPHSTLLHIAYAFLNV
YESYHIPALRRRAVHELYDHIAADDRFTKCISIGPISKVINMLVRWHVDGSESSVFREHV
DRIPDYLWLGLDGMKMQGTNGSQLWDTAFAVQAYLEAGAHRRKEFQNCLEKAHEFLRISQ
IPDNPPDYKKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEQCPFLTDLVPPER
LRDAVDVLLSMRNSDRGFATYETKRGGLLLELLNPSEVFGDIMIDYTYVECTSAVMQALK
HFQARDPNYRAQEIRETLQKGLDYCCSVQRQDGSWEGSWGVCFTYGIWFGLEAFACMGHT
YKEGCPEIIRACNFLLSHQMEDGGWGEDFESCEQRRYVQSAGSQIHNTCWALMGLMAVGF
PDVTVLERGVRLLLDKQLSNGDWPQENISGVFNKSCAISYTSYRNVFPIWTLGRFFHLHP
ESSLAGLLKN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagaaacatgcctgcgcagaagaggggggccttacaagactgctccagccact
gacctcacacactggcgcctttcttgcacagaggggaggcaaacatggtgttatgtggag
gaggaggatcggaaacaaaccgtgttggaggctcactccttagggctggaaacgagtgac
ctactgaaggatttgccaccaccacaaactgcatatgatggagcgtataatggaatcaca
ttttactccgctttacaagctgaggatggacactgggctggagactatggtggtcctcta
tttctattaccaggtctcctcattgcttgtcatgtgacaaaaacttcattacctgatgcc
acaaagaaggaaatgatccggtacctgcgctccgtccagttaccagatggaggatggggg
ctgcacattgaggacaagagcactgtttttgggacagctctaagctacacctccctgcgc
ctcctcggggtgtcacaggatgatttggatctgacccgagctcggaataacctgctaagc
aaaggtggtgctgttggtattccctcttggggaaagttctggctagctgtactgaatgtg
tatagttgggaaggcatgaacaccctgttcccagaaatgtggctcttgcctcactggttt
ccagctcaccccagcacactttggtgtcactgcagacaagtttatctccctatgagttat
tgttatgccactaggctaagtgctcacgaggatgacctgatccgcagtctgagacaggaa
ctgtatctagaagattatagcagcatcaattggccagcccagaggaacaatgtcgctagc
tgtgacatatatactccacacagtactctgcttcacattgcctatgcttttctgaatgta
tacgagtcctatcacatccctgccctccggcgccgtgcagtgcatgagctgtacgatcac
attgcagcagatgacagattcaccaaatgtatcagcattggaccaatttccaaggtgatt
aacatgttggtccgttggcatgtggatggctcagaatcctctgtcttcagggagcatgtc
gaccgtatacctgattatctttggttgggtttggatggaatgaaaatgcagggtaccaac
ggttctcagctgtgggacacagcttttgctgttcaggcctaccttgaggctggagctcac
cgtagaaaggagtttcagaattgcctggagaaagcacatgaatttctacgaatctcccag
attccagataatccacctgactacaagaaatattataggcagatgaacaagggtgggttt
ccctttagcacacgtgactgtggttggattgtggcagactgtacagctgagggcctgaag
tctgtcatgttactgcaagaacaatgcccctttttaactgatctcgtcccaccagagagg
ctgcgggatgctgttgatgtgttactcagtatgcgcaattctgacagaggctttgctacg
tatgagaccaaacgtggcggactcctgctggaacttctcaatccttctgaggtgtttggg
gacatcatgattgattacacgtatgtggagtgcacatctgctgtaatgcaggcccttaaa
catttccaagcaagggacccaaactacagagcacaggaaatcagagagaccctgcagaaa
gggctggattattgctgttcagtgcagagacaagatggttcctgggaagggtcctggggt
gtgtgctttacatatggtatttggtttggtctggaggcctttgcttgcatgggacataca
tacaaggagggttgccctgaaatcattcgtgcctgcaatttcctgctctcccaccaaatg
gaagatggaggatggggggaagattttgaatcctgcgaacagaggagatatgttcagagc
gcaggctctcagatacacaacacttgctgggccctgatgggtctgatggctgtcgggttc
cctgatgtcactgttttggaaagaggtgtccgacttttactggataaacagctcagtaat
ggggactggccacaggagaatatctcaggagtgtttaacaagagctgtgcaatcagttac
acatcgtatcggaatgtatttcccatctggacccttggccgtttcttccatctgcaccca
gagagctctttggctggacttctaaagaactga
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