Xenopus tropicalis (tropical clawed frog): 733953
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Entry
733953 CDS
T01011
Symbol
rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
xtr04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
733953 (rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
733953 (rapgef1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
733953
NCBI-ProteinID:
NP_001039130
Xenbase:
XB-GENE-5729483
UniProt:
Q28C28
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All DBs
Position
8:12158711..12218039
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AA seq
1035 aa
AA seq
DB search
MSGKIEKADSQRSHLSSFTMKLKDKFHSPKIKRTPSKKGKPADLTVKTEEKPVNKTLSRL
EEQEKEVVNALRYFKTIVDKMAVDKMVLVMLPGSASKVLEAILPLVQVDTRCQESTAISS
CYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKDVIKAVLDGVKELVRLMIEKQEHP
SPTTTVKPSLPASKTDSTTELPLSERELEILNKTPEPTSKEAQVDSLESEELAPPKPPLP
GIRVMDNSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPIGINNQDFEGDCYVRRR
LSGGSQSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDNYDPDYEFL
QEDLSRTDQVPGHGTILSPLPESLESASPFQGQSFQMPAGDTPNSEHSAVETPPALPQKK
RRSTAPQTSDGIRGCYERHPSQYDNLCEDDLSPFVSAAMPPFAAVSPFQQGSPSQAEFLG
DFVAAESDGIPENPPPLPEKKNKHMMTYMRFVEDYSEPQPSVFYQTPQNEHIYQQKNKHL
REVYGFNDSFSSPESGHERVPPPALPPKQRQMDSPLPNEGPQQNCTLPCLPGKDNHEASE
RPPKSPDCHSDENGEGEEEEELDELSLVDHNEIMAKLTLKQEGDDGPDVRGGSGDILLVH
ATETDRKDLVLYFEAFLTTYRTFITPEELIQKLQYRYERFCHFQDTFKQRVSKNTFFVLV
RVVDELCLVEMTDEILKLLMELVFRLVCKGELSLARILRKNILEKVENKRMLHHANSALK
PLAARGVAARPGTLHDFHSLEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQF
TEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIR
RLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDH
IDGKVNFSKRWQQFNILDSMRRFQQVHYEIRRNDEIISFFNDFSDHLAEEALWELSLKIK
PRNVTRRKTERDEKT
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggaaaatagagaaagcagacagccagcgttcccacctctcctctttcaccatg
aagctcaaggacaaattccactcccccaaaatcaagcgcaccccgtccaagaaggggaag
ccggccgacctcaccgtcaaaacagaagagaaacccgtcaacaaaaccttaagccgcttg
gaggaacaggagaaagaagtcgttaatgccttgcgttactttaagacaattgttgacaag
atggcggtggacaagatggtgctggtgatgctgccagggtcggcgagcaaagtgttggaa
gccattttgccattggtgcaagtggatacccggtgtcaagaaagcaccgccatctcttcc
tgctacagccgcgtgtaccaatccctcgccaatctgattcgctggtctgaccaggtcatg
ctggaaggcgtcaactcggaggacaaggagatggtcaccaccgtcaaagacgtgataaag
gccgtcctggatggcgtgaaggaactggtgcgcctgatgattgagaaacaggaacaccca
tctcccactaccacagtgaagcccagtttaccagcatccaaaactgacagcaccacagaa
ttgcccttatctgagcgtgagctagaaatcctcaacaagactcctgagccgacatctaag
gaagctcaagtagacagtttggagagtgaagagttagcgccgccaaagcccccgctacca
ggaatccgagtaatggataacagccctccacccgctttacccccaaagaaaagacaatct
gcaccttcacccacccgagtggcagtggtggcacccatgagccgtgccactagtggctcc
agcttgcccattggaattaataaccaggattttgaaggggattgctacgtacgtcgcagg
ttatccggtggaagtcagtcatacgggggagagtcgccgcgcctttctccctgcagtagt
atagggaagctcagcaaatcagacgagcagctctcttcgctggacagagacagcggccag
tgctcccgaaacaccagctgtgaaactctagataactatgacccagactatgaattcctg
caagaggacctctccagaacagaccaagtgccgggccatggaaccattctcagccctctc
cctgaatccctcgagtctgcctccccctttcaaggacagagcttccagatgcccgccggc
gacaccccaaattcagagcattcggctgtagaaaccccacccgccctacctcagaagaaa
aggaggagtacggccccccagacttccgacggtatccgcggctgctacgaaaggcacccc
tctcagtatgataacctctgcgaagatgacttgtccccatttgttagtgccgctatgcct
ccctttgctgccgtctcgcctttccagcaaggaagcccttctcaggcagaattcctgggg
gactttgttgccgcagagtcggatgggattccagagaatcctcccccactccctgagaag
aagaacaaacatatgatgacctacatgcgctttgtagaagactactctgaaccgcagccg
tccgtcttctaccaaaccccgcagaacgagcacatataccagcagaagaacaagcatctc
cgcgaggtttacggcttcaacgactcgttcagcagccccgaatctggccacgagcgtgtt
ccgccccctgccttacccccaaagcaaaggcaaatggattctcctttacccaatgaaggg
cctcagcagaactgcaccctgccctgtctgccaggcaaagacaaccacgaggcatcagag
aggcctccaaagtcccccgattgccacagcgatgagaatggcgagggggaagaggaagaa
gagctcgatgaactctcccttgttgaccataacgagattatggctaagctgaccctgaag
caagagggtgatgatggaccggacgtgcggggcggctccggtgacatcttgctggtccat
gcaacggaaaccgatcgcaaagatctcgtcctgtacttcgaagccttcctgacaacatac
cgcacctttattacccccgaggagctgattcagaagctccagtacagatatgagaggttc
tgtcactttcaagacactttcaagcagcgcgtgagcaagaacaccttcttcgtgctggtg
agagtggtggacgagttatgcttggtcgagatgacagatgagatcctgaagctgctgatg
gaactcgtcttccgtctggtgtgtaaaggggaacttagcctggctcgcatcttgcgcaag
aacattctggaaaaggtggagaataagagaatgctgcaccacgccaattctgcacttaag
cccctggctgccagaggagtagcagcaaggccagggacgctccacgatttccacagtctt
gaaattgcagagcagctgactctgctggatgcagaactcttctataaaatagagattcct
gaggttctgctttgggcaaaagagcaaaacgaggagaagagccccaatttaacacagttc
acagagcactttaacaacatgtcatactgggtccgatccattatcatgcttcaggagaaa
gcccaggaccgagagcgattgctgcttaaattcattaaaatcatgaagcaccttcggaaa
ctgaacaactttaactcctaccttgccatcctgtctgcgctggactccgcccccattcgc
aggctggaatggcagaagcagacgtcagagggcctggcggaatactgcacattgattgac
agctcgtcctccttcagagcctatagggcagccctggctgaggttgaacccccctgtatc
ccctacttaggcctgatcctgcaggatcttacctttgtacatctggggaaccccgaccac
attgatgggaaagtcaacttctccaagcgttggcagcagttcaacattttggacagtatg
aggcgattccagcaagtacattacgagatccgccgcaacgatgaaatcatctccttcttc
aacgacttcagcgaccacctggccgaggaggctctgtgggaactgtccctaaagataaaa
cctcgcaacgtcacccggcgcaaaacagaaagggacgagaaaacttaa
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