KEGG   Xenopus tropicalis (tropical clawed frog): 733953
Entry
733953            CDS       T01011                                 
Symbol
rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1
  KO
K06277  Rap guanine nucleotide exchange factor 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510  Focal adhesion
xtr04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    733953 (rapgef1)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    733953 (rapgef1)
SSDB
Motif
Pfam: RasGEF RasGEF_N
Other DBs
NCBI-GeneID: 733953
NCBI-ProteinID: NP_001039130
Xenbase: XB-GENE-5729483
UniProt: Q28C28
LinkDB
Position
8:12158711..12218039
AA seq 1035 aa
MSGKIEKADSQRSHLSSFTMKLKDKFHSPKIKRTPSKKGKPADLTVKTEEKPVNKTLSRL
EEQEKEVVNALRYFKTIVDKMAVDKMVLVMLPGSASKVLEAILPLVQVDTRCQESTAISS
CYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKDVIKAVLDGVKELVRLMIEKQEHP
SPTTTVKPSLPASKTDSTTELPLSERELEILNKTPEPTSKEAQVDSLESEELAPPKPPLP
GIRVMDNSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPIGINNQDFEGDCYVRRR
LSGGSQSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDNYDPDYEFL
QEDLSRTDQVPGHGTILSPLPESLESASPFQGQSFQMPAGDTPNSEHSAVETPPALPQKK
RRSTAPQTSDGIRGCYERHPSQYDNLCEDDLSPFVSAAMPPFAAVSPFQQGSPSQAEFLG
DFVAAESDGIPENPPPLPEKKNKHMMTYMRFVEDYSEPQPSVFYQTPQNEHIYQQKNKHL
REVYGFNDSFSSPESGHERVPPPALPPKQRQMDSPLPNEGPQQNCTLPCLPGKDNHEASE
RPPKSPDCHSDENGEGEEEEELDELSLVDHNEIMAKLTLKQEGDDGPDVRGGSGDILLVH
ATETDRKDLVLYFEAFLTTYRTFITPEELIQKLQYRYERFCHFQDTFKQRVSKNTFFVLV
RVVDELCLVEMTDEILKLLMELVFRLVCKGELSLARILRKNILEKVENKRMLHHANSALK
PLAARGVAARPGTLHDFHSLEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQF
TEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIR
RLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDH
IDGKVNFSKRWQQFNILDSMRRFQQVHYEIRRNDEIISFFNDFSDHLAEEALWELSLKIK
PRNVTRRKTERDEKT
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgtccgggaaaatagagaaagcagacagccagcgttcccacctctcctctttcaccatg
aagctcaaggacaaattccactcccccaaaatcaagcgcaccccgtccaagaaggggaag
ccggccgacctcaccgtcaaaacagaagagaaacccgtcaacaaaaccttaagccgcttg
gaggaacaggagaaagaagtcgttaatgccttgcgttactttaagacaattgttgacaag
atggcggtggacaagatggtgctggtgatgctgccagggtcggcgagcaaagtgttggaa
gccattttgccattggtgcaagtggatacccggtgtcaagaaagcaccgccatctcttcc
tgctacagccgcgtgtaccaatccctcgccaatctgattcgctggtctgaccaggtcatg
ctggaaggcgtcaactcggaggacaaggagatggtcaccaccgtcaaagacgtgataaag
gccgtcctggatggcgtgaaggaactggtgcgcctgatgattgagaaacaggaacaccca
tctcccactaccacagtgaagcccagtttaccagcatccaaaactgacagcaccacagaa
ttgcccttatctgagcgtgagctagaaatcctcaacaagactcctgagccgacatctaag
gaagctcaagtagacagtttggagagtgaagagttagcgccgccaaagcccccgctacca
ggaatccgagtaatggataacagccctccacccgctttacccccaaagaaaagacaatct
gcaccttcacccacccgagtggcagtggtggcacccatgagccgtgccactagtggctcc
agcttgcccattggaattaataaccaggattttgaaggggattgctacgtacgtcgcagg
ttatccggtggaagtcagtcatacgggggagagtcgccgcgcctttctccctgcagtagt
atagggaagctcagcaaatcagacgagcagctctcttcgctggacagagacagcggccag
tgctcccgaaacaccagctgtgaaactctagataactatgacccagactatgaattcctg
caagaggacctctccagaacagaccaagtgccgggccatggaaccattctcagccctctc
cctgaatccctcgagtctgcctccccctttcaaggacagagcttccagatgcccgccggc
gacaccccaaattcagagcattcggctgtagaaaccccacccgccctacctcagaagaaa
aggaggagtacggccccccagacttccgacggtatccgcggctgctacgaaaggcacccc
tctcagtatgataacctctgcgaagatgacttgtccccatttgttagtgccgctatgcct
ccctttgctgccgtctcgcctttccagcaaggaagcccttctcaggcagaattcctgggg
gactttgttgccgcagagtcggatgggattccagagaatcctcccccactccctgagaag
aagaacaaacatatgatgacctacatgcgctttgtagaagactactctgaaccgcagccg
tccgtcttctaccaaaccccgcagaacgagcacatataccagcagaagaacaagcatctc
cgcgaggtttacggcttcaacgactcgttcagcagccccgaatctggccacgagcgtgtt
ccgccccctgccttacccccaaagcaaaggcaaatggattctcctttacccaatgaaggg
cctcagcagaactgcaccctgccctgtctgccaggcaaagacaaccacgaggcatcagag
aggcctccaaagtcccccgattgccacagcgatgagaatggcgagggggaagaggaagaa
gagctcgatgaactctcccttgttgaccataacgagattatggctaagctgaccctgaag
caagagggtgatgatggaccggacgtgcggggcggctccggtgacatcttgctggtccat
gcaacggaaaccgatcgcaaagatctcgtcctgtacttcgaagccttcctgacaacatac
cgcacctttattacccccgaggagctgattcagaagctccagtacagatatgagaggttc
tgtcactttcaagacactttcaagcagcgcgtgagcaagaacaccttcttcgtgctggtg
agagtggtggacgagttatgcttggtcgagatgacagatgagatcctgaagctgctgatg
gaactcgtcttccgtctggtgtgtaaaggggaacttagcctggctcgcatcttgcgcaag
aacattctggaaaaggtggagaataagagaatgctgcaccacgccaattctgcacttaag
cccctggctgccagaggagtagcagcaaggccagggacgctccacgatttccacagtctt
gaaattgcagagcagctgactctgctggatgcagaactcttctataaaatagagattcct
gaggttctgctttgggcaaaagagcaaaacgaggagaagagccccaatttaacacagttc
acagagcactttaacaacatgtcatactgggtccgatccattatcatgcttcaggagaaa
gcccaggaccgagagcgattgctgcttaaattcattaaaatcatgaagcaccttcggaaa
ctgaacaactttaactcctaccttgccatcctgtctgcgctggactccgcccccattcgc
aggctggaatggcagaagcagacgtcagagggcctggcggaatactgcacattgattgac
agctcgtcctccttcagagcctatagggcagccctggctgaggttgaacccccctgtatc
ccctacttaggcctgatcctgcaggatcttacctttgtacatctggggaaccccgaccac
attgatgggaaagtcaacttctccaagcgttggcagcagttcaacattttggacagtatg
aggcgattccagcaagtacattacgagatccgccgcaacgatgaaatcatctccttcttc
aacgacttcagcgaccacctggccgaggaggctctgtgggaactgtccctaaagataaaa
cctcgcaacgtcacccggcgcaaaacagaaagggacgagaaaacttaa

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