Xenopus tropicalis (tropical clawed frog): 733978
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Entry
733978 CDS
T01011
Symbol
zbed1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
733978 (zbed1)
04121 Ubiquitin system [BR:
xtr04121
]
733978 (zbed1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
733978 (zbed1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
733978 (zbed1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
DUF6023
Motif
Other DBs
NCBI-GeneID:
733978
NCBI-ProteinID:
XP_004911791
Xenbase:
XB-GENE-6084277
UniProt:
A0A803JD80
LinkDB
All DBs
Position
2:38699564..38716976
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AA seq
693 aa
AA seq
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MENKNAEGLQPDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEYCEFVKSNTEQMREAFATAFSKLKPESSQQVVQETLIMKNTQSFEN
KKHLELTSSVISLICEGMYPASILDEPTFKNLLKTAEPRYEVPMRKYICSRVLPEKYNAI
REMVLKDLTDILWCGISTDMWKSVTQNRSYVTLSVYFMSTGPSNCLSVNSRCLKTFEVPE
ENKAETITRVLYETFIEWGISAKVFGATTDFSKDIVKACSLLDIPVDMPCLGQTFDMGIQ
QAFQLPKLSSLLSRCRKLVEYFQQSSIAMYMLCEKQKQQNLFPCMLISDRVSWWGSTLVM
LQRLKEQQFTIAGVLVEDSNNHHLMLEASEWNTIEGLVDLLQPFKQVAEMLSVSKYPTIS
MVKPLLHMLLNTSLNIKETDPKEISMAKEVIAKVLSSTYQQTPEIDMFLNVATFLDPRYK
KLPFLSAFERAQVENRVIEEAKCFIDKGKENIKNEEKVFIISEEPPMKKMASSTPPPTSS
INSMLAEIFCQSGSSEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLTLFPLLPK
VLQKYWCIRPTRVFPERLFNSSANVVNSKRNRLAPAHVDEQIFLYENTRNCSEAEPEDDD
EGEWGLQQEQFFNLSDSVNVDSAFFSIKDNGFI
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaaatgcagaaggtttgcaacctgaccttaaactagttgcccacccgaga
gcaaagagcaaggtatggaagtactttgggtttgacaccaacgcagagggatgtatattg
cagtggaagaagatatactgccgcatttgtatggcccaaattgcctattctggaaacacc
tcaaacctttcttatcaccttgagaaaaaccacccagatgagtattgtgaatttgtaaag
agcaatactgaacaaatgagagaagcatttgcaacagccttttccaaattaaagccagaa
tcatcccagcaagttgtacaggaaactttaataatgaaaaacacccagagcttcgagaat
aaaaaacacctggagctaacatcttctgttatcagcctgatttgtgagggaatgtaccct
gcttctatattagatgaacctacatttaaaaaccttttaaaaacagcagaaccaaggtat
gaggttcctatgaggaagtatatatgtagcagggtattgccagagaaatataatgctatt
cgggagatggttttgaaagatctgaccgatatcttgtggtgtgggatatccacagatatg
tggaagagtgtaactcaaaacaggtcatatgtgaccctctcagtctactttatgtctact
ggtccctctaattgtttgtctgtaaactcccgctgtttaaaaacattcgaagtcccagag
gaaaacaaagcagagactattacacgtgtactgtatgaaaccttcattgagtggggaatc
agtgcgaaagtttttggagctacaactgattttagcaaagacattgttaaggcatgttca
cttcttgatattcctgtagacatgccttgtttagggcagacatttgatatgggaatacag
caagcttttcaacttccaaagctgtctagcttgctttccagatgtcgcaaacttgttgag
tattttcagcagtcctccattgcaatgtacatgctctgtgagaaacagaaacaacaaaat
ctctttccctgcatgctcataagcgaccgtgtttcctggtggggcagcacacttgtgatg
ctgcaacggcttaaagaacagcaatttacgattgcaggtgttttggtggaagatagcaat
aaccatcatctgatgttagaagctagtgagtggaatacaattgaaggtttggtggacctc
ctacagccgttcaagcaagtcgctgagatgttgtcagtgtcaaaatatccaacaattagt
atggtcaaaccccttctccatatgctgctaaatacatcattaaacatcaaagagacagac
ccaaaagaaataagtatggctaaagaagtgattgctaaagttctatcctccacttatcag
cagacaccagaaatagacatgtttctaaatgttgcaacttttttagatccgcgatataaa
aaactgccttttctgtctgcatttgagcgtgcacaagttgagaacagagtgatagaggag
gcaaaatgtttcatagacaaaggaaaagagaacattaaaaatgaagaaaaagttttcata
atttcagaagagcccccaatgaaaaaaatggcttcttctaccccgccccctaccagcagc
atcaacagtatgttggctgagattttttgccagtcgggatcatctgaagaccaggaggaa
tggcatgcccaggttgtcgaagaactgagtaattttaagtcacaaaaggttcttggtcta
aatgaagatccgcttaagtggtggtctgatcgtttgacattgtttccacttttaccaaag
gtacttcaaaagtactggtgtataagacctacccgagtcttccctgaacgtctgttcaat
tcatcagccaatgttgtaaattcaaaaagaaatagattagctcctgctcatgtggatgag
cagatatttttatatgaaaacacacgcaattgctctgaagcagagccagaagatgatgat
gaaggagagtggggcttgcaacaagaacagttttttaatttaagtgactcggttaatgtt
gacagtgctttcttttccataaaggataatggatttatttag
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