KEGG   Xenopus tropicalis (tropical clawed frog): 734009
Entry
734009            CDS       T01011                                 
Name
(RefSeq) novel zinc finger C-x8-C-x5-C-x3-H type (and similar) protein
  KO
K18753  butyrate response factor
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    734009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    734009
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     734009
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_4 zf-CCCH_UNK-like_4th zf-CCCH_2 zf-CCCH_9
Other DBs
NCBI-GeneID: 734009
NCBI-ProteinID: NP_001039174
Xenbase: XB-GENE-5726465
UniProt: Q28FK2
LinkDB
Position
8:81535549..81541409
AA seq 297 aa
MPSTMLSSLLSPFQELDMDTNLSKEFMALLSEKRFNVIPAEELESTYSSCPINLNKNEKS
REKLTEFSVESLERLWTCNNQLSVPNPLCRIPFLADRSVSMIEESKNIFSPPKPLSSRYK
TELCRTFHEIGSCKYGSRCHFIHNAEEQRFIKSTKGQRPPLLRHSISCSGIPSSTSLDSL
FSSSLSSFSPASPSFSPSASIFSSGPPSPTLNLTPFFHPASPPSPGIRSPMPVRELAQFP
PYKKSEPSTRDCFLDKEISALKDCFLDKEISALKDCKENCSNSTEAKRLPIFSRLSD
NT seq 894 nt   +upstreamnt  +downstreamnt
atgcccagcaccatgctctccagcctgctcagcccattccaggagctggatatggatacc
aacttatccaaggaatttatggctctgctgtctgagaagagatttaatgttattcctgct
gaagaactggagagtacctattcatcttgccctatcaacttaaacaaaaatgagaagagt
agggagaaattaacagaattcagtgttgaatctttggagagactatggacctgcaacaac
cagctttctgttccgaatcccttatgtcgcatccctttcctagctgaccgctctgttagt
atgattgaggagagcaaaaatatcttttctccacctaagccactctcttcccgatacaag
actgagctttgtcgtactttccatgagattggctcctgcaagtatggatctcgctgccac
tttatccacaatgcagaagagcaaaggttcattaagagtacaaagggacagcgccctcca
cttctgaggcacagtataagctgctcagggatcccttcttccacttctttagattccctc
ttctcttcctcactctcctccttttctccagcttctcccagcttttccccatctgcttcc
attttcagctctggccctccctctcctacacttaatttgacgcctttctttcacccggca
tcgcccccttccccaggaatacgaagccctatgcctgtaagagagttggcccagtttcca
ccttacaagaagtccgaaccaagcactcgggactgctttttagataaggagatcagtgct
ttgaaggactgctttttagataaggagatcagtgctttgaaagactgcaaggagaactgt
agcaattccactgaagccaagcgtctcccaattttcagccgcttgtctgattaa

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