Xenopus tropicalis (tropical clawed frog): 734027
Help
Entry
734027 CDS
T01011
Symbol
erbin
Name
(RefSeq) erbin isoform X3
KO
K12796
erbb2-interacting protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
734027 (erbin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
PDZ_2
LRR_LRWD1
LRR_5
PDZ_6
LRR_NXF1-5
LRR_At5g56370
TnsE_C
Motif
Other DBs
NCBI-GeneID:
734027
NCBI-ProteinID:
XP_002934234
Xenbase:
XB-GENE-977040
UniProt:
A0A6I8SIU4
LinkDB
All DBs
Position
1:complement(187503184..187606539)
Genome browser
AA seq
1397 aa
AA seq
DB search
MTTKRNLLVRLVPCRCLRGEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEE
LPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIV
EASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTM
NRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKN
NIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYLPDSIGGLTA
IEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESL
PEEMGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDNQSKPLIPLQKETDQDTQKV
VLTNYMFPQQPRTEDVIFSSDNESFNLSLWEEQRKQRAQVAFECDEVRDDREAPAREGIL
KRYPTPYPDELKNMVKTVQTIVHRKKDEEKAEEANKETKQTDGDLITLQDVGVKTSEAIL
VEIDTEDKEKNMPANCIKKLHEPSTENSNGNSQSTTLVNNFWNAKTANHEDTLEGSEDLS
YDDEMKMAEMRPPLIETSMNQPKVVALSNNKKDDTKDADSLSDEVTRNSNQNNSNCSSPS
RMSDSVSLNTDSSHDTSLCSPEKDCNIGANSKIRQEDENLNNFMQNGDKLSPADKRELAE
LPDINNDVELVTRDRRVINSMEKPLNLNQINKNNNNVACEDKIHSNSVENSVISKDRVSN
KSFGNYNDETDNIENGNKFSGVCVMNRVNGHLPEEPVSPDTSEPVRSTSEDSVPSVDMCI
SKSTDDLSLGDSVGSVVGSVVKSQSITNIETGALRIYSVLSDNSAPQYATRMSSASAEGQ
NIVRSKSATLLCDQPLQVFTGSSSSSDLAASSSIKKMLFKFDTNHNPEGPYAVAGPQGSP
MSAVPQYNVQYSTSATAKDNLWSQKQSAPVEQGTLPSSRFHPSDSIDNPNYVKHPSNLNF
SNHNNVRSSNMYNVHQRMGPRHVEAWAPTPNDRLLQVATRSTLQRQGSVSSNASVSLGEA
GSARRVLVPEGDYMTYRDLHTVSRGNHMMPGPQRPMSARTYSIDGPNVPRPQSARPSIND
IPERTMSVSDFNYSRTSPSKKPNARVNSEHSLLDTQGRSKVPHDWREQVLRHIEAKKLEK
YPQPGSVGEPMQDDVFVTGQQSYPTIARKESTADSVKKMHMSNGQMCQPSRPQANYSQLH
HHPAQPVGRHPSREQLLDYFTLKVSQQPTYYQIPCSPKQNELSSQEIRVRLVKDPELGFS
ISGGVGGRGNPFRPGDDGIFVTRVQPEGPASKLLQPGDKILQANGYSFINIDHAQAVTLL
KKFQNAVELMVLRDGSV
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaaaaggaacctgctggtgcgcttggtaccgtgccgctgtctgcggggggag
gaagaaactgtgacctctcttgactactctcactgcagcttggaacaggtgccgaaggag
attttcacttttgaaaaaaccttagaggaactttatttggatgccaaccagattgaagag
cttcccaagcaactattcaactgccagtctctgcataagctgagtttgccagacaatgac
ctaacaatattgcctgcatctatagcaaatctcattaatctcagggaactagatgtcagc
aagaatggtatacaggagtttccagaaaacataaagaactgtaaagtactgaccatcgtg
gaggcaagcgtcaaccctatatcaaaacttccagatggattttcccagctgttgaacctt
actcagttatacctaaatgatgctttccttgacttcttgccagcaaattttggcaggtta
acgaaacttcagattttggagcttagagaaaaccagctaaaaatgttaccaaaaactatg
aataggcttactcagctcgagaggctggatctgggaagtaatgaattcacagaagtgcct
gaagtacttgaacaactgagtggtctgaaggaattttggatggatggcaataaattgaca
tatattccagggtttctcggcaatctgaaacaactgacatacctggacgtttcaaaaaat
aatatagaaatggtggaagatggaatctctgggtgtgaaagtttacaggacctcttattg
tccagtaatgcaatacagcagctaccagaatctattggagcacttaagaaattaactaca
ctgaaagtggatgaaaaccaattaatgtacttaccggactctattggaggtcttactgcc
atcgaagatctagactgcagtttcaatgaaattgaagccttaccatcctcaattggacac
ttaatccaaattcggacttttgctgctgaccacaacttcttaacacagttgcctcctgag
attggaacctggaaaagcgctacagtgctattccttcattccaacaagttggaatctctc
cctgaggaaatgggtgatatgcaaaaactcaaagtcatcaatcttagtgacaacagactg
aggaatttgcccttcagcttcacaaggcttcagcagctcactgctatgtggctttcagac
aatcagtctaaaccactcataccactccagaaagaaactgatcaagacacccagaaagtt
gttcttacaaactatatgttccctcagcagccaagaacagaggacgttattttctcatcg
gacaatgaaagctttaatctctctctctgggaagagcagcggaagcagcgggctcaggtc
gccttcgagtgtgatgaagtcagagatgaccgggaagctccagcacgagaagggatcttg
aagaggtacccaacaccatacccagatgagctgaagaacatggtgaagactgttcagacc
attgtccatcggaaaaaagatgaggaaaaagcagaagaagccaataaagagacaaagcaa
accgatggtgatctcattacactgcaggatgtaggtgtaaagacctcggaggcaatcttg
gtagaaattgatacagaggataaggagaaaaacatgccagcaaactgtataaagaagctt
catgaacccagcacagagaattctaatgggaattcacagtcaaccactcttgtaaacaat
ttttggaatgcgaaaacagccaaccatgaagacacacttgagggatcagaagacttatct
tacgatgatgaaatgaagatggcagaaatgaggccacctctaatagagacctccatgaat
caaccaaaagtagtagccttgagcaataacaaaaaagatgatacaaaagatgcagactcc
ttgtctgatgaagtgacccgcaacagtaatcagaacaacagtaattgctcctcgccatct
cggatgtcagactctgtctcactaaacaccgacagcagccatgatacttcattatgttct
ccggagaaagattgcaacattggggccaattcgaaaataagacaagaagatgaaaactta
aataactttatgcaaaatggagacaagctgagccctgctgataaaagagaactagctgag
ctaccagatataaacaacgacgttgaactagttacgagagacagacgagtaattaactcc
atggaaaagccacttaacctaaaccaaataaacaaaaacaacaacaacgtcgcttgtgaa
gataaaatacattctaactctgtggaaaattccgtgatttcaaaagatagggtctccaat
aaaagttttggcaattacaatgatgaaacagacaacatagaaaatgggaataaattctct
ggagtctgtgtgatgaatagagtaaacggccatttgcctgaagagccagtgtctccagac
accagtgagccggtaaggagcacttcagaggactctgtgccttctgttgatatgtgcatc
tcaaagagcaccgatgacctgtcacttggggacagtgtgggctcagtagtgggctcagta
gtgaagtctcaaagcatcacaaacattgagactggagcactaaggatctacagtgtcctc
agcgataacagtgcaccacaatatgctacaaggatgtcttctgcaagtgctgaagggcaa
aatattgtcagaagtaagtcggcaactcttctttgtgatcagcccttacaagtgttcacc
gggtcgtcctcttcctctgacttagcagcatcgtcatccataaagaaaatgctgtttaaa
tttgataccaaccacaatcctgaggggccatatgcagtggcagggccccagggatctcca
atgtctgctgtgcctcaatataatgtgcagtatagcaccagtgctacagccaaagataac
ctgtggtcacagaaacaaagtgcccctgttgaacaaggaactttgccttcgtctcgcttc
cacccatcagatagcatagataaccccaactatgtcaaacacccttctaacttgaatttt
tccaatcacaacaacgttagatcaagtaacatgtataatgtgcatcaaaggatggggcct
aggcatgtggaagcgtgggccccaacaccaaatgatcggcttcttcaagtagcgacgcga
agtacacttcaaagacaaggcagcgtttcttcaaatgcatctgtatctctcggggaggca
gggtctgctagaagggtgcttgtgccagagggggattatatgacttacagagatctacat
acagtgagcagaggaaatcacatgatgcctggtccacagagaccaatgtctgccaggaca
tatagtattgatggcccgaatgtgcccaggccgcaaagtgcacggccgtccattaatgat
attcctgagagaacaatgtctgtcagtgattttaactactctcggactagcccctctaaa
aagccaaatgccagggtgaactcagagcattcgttattagacactcaaggaagaagtaaa
gtccctcatgactggagagagcaggtcttacggcatattgaggcaaaaaagcttgagaag
tatcctcagcctggcagtgttggagaacctatgcaagatgacgtgtttgtaaccgggcag
cagagttatcccaccattgcacgcaaggaaagcacagccgacagtgtgaaaaagatgcac
atgagcaatggacagatgtgccaaccatcacggcctcaagcaaactatagccaactccat
caccacccagcccagccggtaggaagacatccctctagggagcagctcctcgactatttt
acacttaaagtttctcagcagcctacatattaccagataccctgttctccaaagcaaaat
gagctttcttctcaagagatccgtgtaagacttgtgaaagatcctgagcttggctttagt
atatctggtggcgttggaggtagaggaaatcctttccgaccaggagatgatggtatattt
gtaacaagagttcagccagaaggtccagcatccaagctattgcagcccggggataaaata
ttacaggcaaatggctacagcttcatcaatattgatcatgcccaggctgtcacgttactg
aagaagttccagaatgcagtggagctgatggttttacgggatggctctgtatag
DBGET
integrated database retrieval system
